Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSSCA1O60232 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SSSCA1O60232 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSSCA1O60232 RNA5SP30-201ENST00000365552 115 ntBASIC4.44□□□□□ -1.7
SSSCA1O60232 AL096711.1-201ENST00000404780 554 ntBASIC4.44□□□□□ -1.7
SSSCA1O60232 ZNF37CP-201ENST00000406795 241 ntBASIC4.44□□□□□ -1.7
SSSCA1O60232 AL035422.1-201ENST00000414193 397 ntBASIC4.44□□□□□ -1.7
SSSCA1O60232 COX5BP7-201ENST00000414780 274 ntBASIC4.44□□□□□ -1.7
SSSCA1O60232 SUMO2P8-201ENST00000434672 286 ntBASIC4.44□□□□□ -1.7
SSSCA1O60232 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SSSCA1O60232 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SSSCA1O60232 PA2G4P1-201ENST00000442248 1197 ntBASIC4.44□□□□□ -1.7
SSSCA1O60232 AC012512.1-201ENST00000446594 718 ntBASIC4.44□□□□□ -1.7
SSSCA1O60232 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC4.44□□□□□ -1.7
SSSCA1O60232 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC4.44□□□□□ -1.7
SSSCA1O60232 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC4.44□□□□□ -1.7
SSSCA1O60232 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.44□□□□□ -1.7
SSSCA1O60232 SCARNA20.4-201ENST00000516969 131 ntBASIC4.44□□□□□ -1.7
SSSCA1O60232 SCARNA6.1-201ENST00000516989 238 ntBASIC4.44□□□□□ -1.7
SSSCA1O60232 AC021678.3-201ENST00000517893 476 ntBASIC4.44□□□□□ -1.7
SSSCA1O60232 AC100784.1-201ENST00000522790 310 ntBASIC4.44□□□□□ -1.7
SSSCA1O60232 AP004607.5-201ENST00000532034 217 ntBASIC4.44□□□□□ -1.7
SSSCA1O60232 AC084121.1-201ENST00000533882 835 ntBASIC4.44□□□□□ -1.7
SSSCA1O60232 LSM3P2-201ENST00000551246 273 ntBASIC4.44□□□□□ -1.7
SSSCA1O60232 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.44□□□□□ -1.7
SSSCA1O60232 HSPE1P2-201ENST00000554777 306 ntBASIC4.44□□□□□ -1.7
SSSCA1O60232 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC4.44□□□□□ -1.7
SSSCA1O60232 AC006530.1-201ENST00000555980 571 ntBASIC4.44□□□□□ -1.7
SSSCA1O60232 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.44□□□□□ -1.7
SSSCA1O60232 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC4.44□□□□□ -1.7
SSSCA1O60232 AC092332.1-201ENST00000563684 829 ntBASIC4.44□□□□□ -1.7
SSSCA1O60232 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC4.44□□□□□ -1.7
SSSCA1O60232 RN7SL66P-201ENST00000582099 264 ntBASIC4.44□□□□□ -1.7
SSSCA1O60232 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC4.44□□□□□ -1.7
SSSCA1O60232 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC4.44□□□□□ -1.7
SSSCA1O60232 FAM27E4-201ENST00000605259 342 ntBASIC4.44□□□□□ -1.7
SSSCA1O60232 U91328.4-201ENST00000608919 517 ntBASIC4.44□□□□□ -1.7
SSSCA1O60232 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC4.44□□□□□ -1.7
SSSCA1O60232 MIR6809-201ENST00000612189 116 ntBASIC4.44□□□□□ -1.7
SSSCA1O60232 MIR6885-201ENST00000612241 66 ntBASIC4.44□□□□□ -1.7
SSSCA1O60232 AC012676.3-201ENST00000614983 479 ntBASIC4.44□□□□□ -1.7
SSSCA1O60232 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.44□□□□□ -1.7
SSSCA1O60232 MIR6736-201ENST00000616799 59 ntBASIC4.44□□□□□ -1.7
SSSCA1O60232 AC091059.2-201ENST00000623355 614 ntBASIC4.44□□□□□ -1.7
SSSCA1O60232 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC4.44□□□□□ -1.7
SSSCA1O60232 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.44□□□□□ -1.7
SSSCA1O60232 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SSSCA1O60232 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSSCA1O60232 AP000542.2-201ENST00000623199 6179 ntBASIC4.44□□□□□ -1.7
SSSCA1O60232 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SSSCA1O60232 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
SSSCA1O60232 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SSSCA1O60232 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
SSSCA1O60232 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
SSSCA1O60232 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SSSCA1O60232 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.43□□□□□ -1.7
SSSCA1O60232 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSSCA1O60232 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC4.43□□□□□ -1.7
SSSCA1O60232 AC114947.2-201ENST00000565748 2125 ntBASIC4.43□□□□□ -1.7
SSSCA1O60232 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSSCA1O60232 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSSCA1O60232 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
SSSCA1O60232 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSSCA1O60232 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSSCA1O60232 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
SSSCA1O60232 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SSSCA1O60232 RNA5SP198-201ENST00000410376 127 ntBASIC4.43□□□□□ -1.7
SSSCA1O60232 CTSL3P-202ENST00000412179 788 ntBASIC4.43□□□□□ -1.7
SSSCA1O60232 AL354890.1-201ENST00000413730 346 ntBASIC4.43□□□□□ -1.7
SSSCA1O60232 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.43□□□□□ -1.7
SSSCA1O60232 AL121878.1-201ENST00000418638 859 ntBASIC4.43□□□□□ -1.7
SSSCA1O60232 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC4.43□□□□□ -1.7
SSSCA1O60232 MYB-206ENST00000420123 1051 ntTSL 5 BASIC4.43□□□□□ -1.7
SSSCA1O60232 AC099782.1-201ENST00000425889 474 ntBASIC4.43□□□□□ -1.7
SSSCA1O60232 AC017019.1-201ENST00000426129 261 ntBASIC4.43□□□□□ -1.7
SSSCA1O60232 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC4.43□□□□□ -1.7
SSSCA1O60232 RN7SL254P-201ENST00000460609 284 ntBASIC4.43□□□□□ -1.7
SSSCA1O60232 AC009120.1-201ENST00000493458 473 ntBASIC4.43□□□□□ -1.7
SSSCA1O60232 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SSSCA1O60232 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC4.43□□□□□ -1.7
SSSCA1O60232 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.43□□□□□ -1.7
SSSCA1O60232 AC138517.1-201ENST00000515724 568 ntBASIC4.43□□□□□ -1.7
SSSCA1O60232 RN7SKP238-201ENST00000516483 249 ntBASIC4.43□□□□□ -1.7
SSSCA1O60232 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC4.43□□□□□ -1.7
SSSCA1O60232 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC4.43□□□□□ -1.7
SSSCA1O60232 AC027369.5-201ENST00000533838 755 ntBASIC4.43□□□□□ -1.7
SSSCA1O60232 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.43□□□□□ -1.7
SSSCA1O60232 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.43□□□□□ -1.7
SSSCA1O60232 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.43□□□□□ -1.7
SSSCA1O60232 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.43□□□□□ -1.7
SSSCA1O60232 AL078601.3-201ENST00000573303 535 ntBASIC4.43□□□□□ -1.7
SSSCA1O60232 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC4.43□□□□□ -1.7
SSSCA1O60232 RN7SL657P-201ENST00000582431 293 ntBASIC4.43□□□□□ -1.7
SSSCA1O60232 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC4.43□□□□□ -1.7
SSSCA1O60232 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SSSCA1O60232 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC4.43□□□□□ -1.7
SSSCA1O60232 AL049829.3-202ENST00000604278 711 ntBASIC4.43□□□□□ -1.7
SSSCA1O60232 AC012511.1-201ENST00000608140 449 ntBASIC4.43□□□□□ -1.7
SSSCA1O60232 MIR6829-201ENST00000620375 67 ntBASIC4.43□□□□□ -1.7
SSSCA1O60232 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms