Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SMAD6O43541 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.89□□□□□ -1.47
SMAD6O43541 NXT1P1-201ENST00000458481 316 ntBASIC5.89□□□□□ -1.47
SMAD6O43541 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.89□□□□□ -1.47
SMAD6O43541 RPL32P33-201ENST00000487023 394 ntBASIC5.89□□□□□ -1.47
SMAD6O43541 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.89□□□□□ -1.47
SMAD6O43541 AC009120.1-201ENST00000493458 473 ntBASIC5.89□□□□□ -1.47
SMAD6O43541 AC114322.1-201ENST00000506771 926 ntBASIC5.89□□□□□ -1.47
SMAD6O43541 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.89□□□□□ -1.47
SMAD6O43541 SCARNA6.1-201ENST00000516989 238 ntBASIC5.89□□□□□ -1.47
SMAD6O43541 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.89□□□□□ -1.47
SMAD6O43541 AC090424.1-201ENST00000535243 736 ntBASIC5.89□□□□□ -1.47
SMAD6O43541 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.89□□□□□ -1.47
SMAD6O43541 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.89□□□□□ -1.47
SMAD6O43541 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.89□□□□□ -1.47
SMAD6O43541 AC007346.2-201ENST00000564816 892 ntBASIC5.89□□□□□ -1.47
SMAD6O43541 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC5.89□□□□□ -1.47
SMAD6O43541 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.89□□□□□ -1.47
SMAD6O43541 AC018754.1-201ENST00000607486 925 ntBASIC5.89□□□□□ -1.47
SMAD6O43541 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.89□□□□□ -1.47
SMAD6O43541 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SMAD6O43541 AL357153.4-201ENST00000620487 1016 ntBASIC5.89□□□□□ -1.47
SMAD6O43541 AC069234.4-201ENST00000621276 412 ntBASIC5.89□□□□□ -1.47
SMAD6O43541 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.89□□□□□ -1.47
SMAD6O43541 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.89□□□□□ -1.47
SMAD6O43541 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.89□□□□□ -1.47
SMAD6O43541 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SMAD6O43541 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SMAD6O43541 FBXL21-201ENST00000297158 1305 ntBASIC5.89□□□□□ -1.47
SMAD6O43541 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SMAD6O43541 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
SMAD6O43541 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SMAD6O43541 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
SMAD6O43541 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
SMAD6O43541 AC125336.1-201ENST00000508893 2827 ntBASIC5.89□□□□□ -1.47
SMAD6O43541 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.89□□□□□ -1.47
SMAD6O43541 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.88□□□□□ -1.47
SMAD6O43541 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.88□□□□□ -1.47
SMAD6O43541 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SMAD6O43541 ZNF101P1-201ENST00000435701 1720 ntBASIC5.88□□□□□ -1.47
SMAD6O43541 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.88□□□□□ -1.47
SMAD6O43541 AL161912.4-201ENST00000623889 2468 ntBASIC5.88□□□□□ -1.47
SMAD6O43541 AC097063.1-201ENST00000426714 1797 ntBASIC5.88□□□□□ -1.47
SMAD6O43541 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SMAD6O43541 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SMAD6O43541 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.88□□□□□ -1.47
SMAD6O43541 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SMAD6O43541 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.88□□□□□ -1.47
SMAD6O43541 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.88□□□□□ -1.47
SMAD6O43541 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SMAD6O43541 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SMAD6O43541 AL159987.1-201ENST00000347911 293 ntBASIC5.88□□□□□ -1.47
SMAD6O43541 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.88□□□□□ -1.47
SMAD6O43541 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
SMAD6O43541 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.88□□□□□ -1.47
SMAD6O43541 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.88□□□□□ -1.47
SMAD6O43541 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.88□□□□□ -1.47
SMAD6O43541 AL662874.1-201ENST00000426065 230 ntBASIC5.88□□□□□ -1.47
SMAD6O43541 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.88□□□□□ -1.47
SMAD6O43541 AC015983.1-201ENST00000441577 373 ntBASIC5.88□□□□□ -1.47
SMAD6O43541 MTND2P25-201ENST00000449028 610 ntBASIC5.88□□□□□ -1.47
SMAD6O43541 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.88□□□□□ -1.47
SMAD6O43541 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SMAD6O43541 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.88□□□□□ -1.47
SMAD6O43541 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.88□□□□□ -1.47
SMAD6O43541 TRBV5-2-201ENST00000489095 273 ntBASIC5.88□□□□□ -1.47
SMAD6O43541 RN7SL101P-201ENST00000496350 279 ntBASIC5.88□□□□□ -1.47
SMAD6O43541 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.88□□□□□ -1.47
SMAD6O43541 CYCSP22-201ENST00000517555 339 ntBASIC5.88□□□□□ -1.47
SMAD6O43541 AC027026.1-201ENST00000532323 742 ntBASIC5.88□□□□□ -1.47
SMAD6O43541 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.88□□□□□ -1.47
SMAD6O43541 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.88□□□□□ -1.47
SMAD6O43541 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
SMAD6O43541 AC012146.2-201ENST00000576545 416 ntBASIC5.88□□□□□ -1.47
SMAD6O43541 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.88□□□□□ -1.47
SMAD6O43541 AL357094.1-201ENST00000603845 844 ntBASIC5.88□□□□□ -1.47
SMAD6O43541 AC022306.3-201ENST00000619930 550 ntBASIC5.88□□□□□ -1.47
SMAD6O43541 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.88□□□□□ -1.47
SMAD6O43541 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.88□□□□□ -1.47
SMAD6O43541 AC097655.1-201ENST00000635075 318 ntBASIC5.88□□□□□ -1.47
SMAD6O43541 AC087565.3-203ENST00000641018 837 ntBASIC5.88□□□□□ -1.47
SMAD6O43541 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SMAD6O43541 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.88□□□□□ -1.47
SMAD6O43541 AC005261.6-201ENST00000623072 1387 ntBASIC5.88□□□□□ -1.47
SMAD6O43541 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.88□□□□□ -1.47
SMAD6O43541 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.88□□□□□ -1.47
SMAD6O43541 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SMAD6O43541 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SMAD6O43541 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.88□□□□□ -1.47
SMAD6O43541 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
SMAD6O43541 MRE11P1-201ENST00000464884 2127 ntBASIC5.87□□□□□ -1.47
SMAD6O43541 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
SMAD6O43541 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.87□□□□□ -1.47
SMAD6O43541 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SMAD6O43541 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
SMAD6O43541 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.87□□□□□ -1.47
SMAD6O43541 MTND4P11-201ENST00000417020 1058 ntBASIC5.87□□□□□ -1.47
SMAD6O43541 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.87□□□□□ -1.47
SMAD6O43541 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.87□□□□□ -1.47
SMAD6O43541 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms