Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HOXA3O43365 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC5.58□□□□□ -1.52
HOXA3O43365 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA3O43365 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC5.58□□□□□ -1.52
HOXA3O43365 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA3O43365 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA3O43365 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
HOXA3O43365 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXA3O43365 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
HOXA3O43365 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC5.58□□□□□ -1.52
HOXA3O43365 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXA3O43365 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HOXA3O43365 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXA3O43365 TMEM75-201ENST00000624314 2165 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA3O43365 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA3O43365 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA3O43365 AC092111.2-201ENST00000611627 1414 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXA3O43365 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
HOXA3O43365 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA3O43365 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA3O43365 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
HOXA3O43365 AC016251.2-201ENST00000623393 3089 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 OR2AH1P-202ENST00000641232 2744 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
HOXA3O43365 AP000776.1-201ENST00000530032 1663 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA3O43365 DLEU2L-201ENST00000371086 3555 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXA3O43365 SEC63P2-201ENST00000503863 1939 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA3O43365 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
HOXA3O43365 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA3O43365 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HOXA3O43365 RNU6-560P-201ENST00000364007 108 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA3O43365 MT-TP-201ENST00000387461 68 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 AC026310.1-201ENST00000396004 378 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 AL390774.1-201ENST00000411924 246 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXA3O43365 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXA3O43365 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXA3O43365 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXA3O43365 AC124944.2-201ENST00000429866 1242 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXA3O43365 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
HOXA3O43365 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC5.57□□□□□ -1.52
HOXA3O43365 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.57□□□□□ -1.52
HOXA3O43365 PCNPP2-201ENST00000441651 455 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 AC005002.1-201ENST00000447458 540 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 OR51P1P-201ENST00000447547 942 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.57□□□□□ -1.52
HOXA3O43365 CALM1P2-201ENST00000452941 448 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 AC019084.1-201ENST00000457337 432 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 RPL30P6-201ENST00000475925 342 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXA3O43365 AC068724.1-201ENST00000487100 792 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 AC015524.1-201ENST00000491585 472 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 OR7E157P-201ENST00000494376 911 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 RN7SL143P-201ENST00000496780 297 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC5.57□□□□□ -1.52
HOXA3O43365 AC010424.1-201ENST00000506336 297 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXA3O43365 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXA3O43365 AC105185.1-201ENST00000518705 535 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXA3O43365 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC5.57□□□□□ -1.52
HOXA3O43365 DPPA3P2-202ENST00000557188 1219 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXA3O43365 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC5.57□□□□□ -1.52
HOXA3O43365 ULK4P2-202ENST00000564187 492 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 AC010546.1-201ENST00000569391 485 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 ISCA1P3-201ENST00000577104 373 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 MIR3912-201ENST00000577566 105 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 MIR4732-201ENST00000581873 76 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HOXA3O43365 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.57□□□□□ -1.52
HOXA3O43365 AF131215.7-201ENST00000602443 707 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 NTAN1P1-201ENST00000603150 646 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.57□□□□□ -1.52
HOXA3O43365 AL159169.2-201ENST00000610061 1269 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA3O43365 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.57□□□□□ -1.52
HOXA3O43365 AC022509.4-201ENST00000621404 572 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.57□□□□□ -1.52
HOXA3O43365 MIR4278-201ENST00000636094 69 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
HOXA3O43365 OR7E91P-202ENST00000642062 1198 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA3O43365 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXA3O43365 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA3O43365 CD86-209ENST00000493101 1572 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXA3O43365 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.57□□□□□ -1.52
HOXA3O43365 AC138393.1-206ENST00000540997 1886 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA3O43365 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC5.57□□□□□ -1.52
HOXA3O43365 KCNMB3P1-202ENST00000493696 3389 ntBASIC5.57□□□□□ -1.52
HOXA3O43365 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXA3O43365 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms