Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
SOX1O00570 AL391422.1-201ENST00000402155 436 ntBASIC7.3□□□□□ -1.24
SOX1O00570 RNU6-757P-201ENST00000410334 100 ntBASIC7.3□□□□□ -1.24
SOX1O00570 RN7SKP108-201ENST00000411367 328 ntBASIC7.3□□□□□ -1.24
SOX1O00570 AC007899.1-201ENST00000412776 775 ntBASIC7.3□□□□□ -1.24
SOX1O00570 BTF3P9-201ENST00000418784 283 ntBASIC7.3□□□□□ -1.24
SOX1O00570 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC7.3□□□□□ -1.24
SOX1O00570 ETF1P3-201ENST00000430422 1160 ntBASIC7.3□□□□□ -1.24
SOX1O00570 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC7.3□□□□□ -1.24
SOX1O00570 UBBP5-201ENST00000446970 266 ntBASIC7.3□□□□□ -1.24
SOX1O00570 VN1R34P-201ENST00000447387 883 ntBASIC7.3□□□□□ -1.24
SOX1O00570 AL050341.1-201ENST00000447743 313 ntBASIC7.3□□□□□ -1.24
SOX1O00570 RHEBP1-201ENST00000448647 556 ntBASIC7.3□□□□□ -1.24
SOX1O00570 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC7.3□□□□□ -1.24
SOX1O00570 ZNF114P1-201ENST00000453500 292 ntBASIC7.3□□□□□ -1.24
SOX1O00570 MEF2AP1-201ENST00000454867 863 ntBASIC7.3□□□□□ -1.24
SOX1O00570 AP002453.1-201ENST00000492327 668 ntBASIC7.3□□□□□ -1.24
SOX1O00570 AC138853.1-201ENST00000503549 823 ntBASIC7.3□□□□□ -1.24
SOX1O00570 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
SOX1O00570 AC004069.2-201ENST00000505438 1114 ntBASIC7.3□□□□□ -1.24
SOX1O00570 PABPC1P1-201ENST00000506347 591 ntBASIC7.3□□□□□ -1.24
SOX1O00570 AC083906.1-201ENST00000509298 406 ntBASIC7.3□□□□□ -1.24
SOX1O00570 ATG10-208ENST00000513634 618 ntTSL 2 BASIC7.3□□□□□ -1.24
SOX1O00570 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC7.3□□□□□ -1.24
SOX1O00570 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC7.3□□□□□ -1.24
SOX1O00570 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SOX1O00570 AC068305.2-201ENST00000550567 1205 ntBASIC7.3□□□□□ -1.24
SOX1O00570 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC7.3□□□□□ -1.24
SOX1O00570 AC103968.1-201ENST00000557841 573 ntBASIC7.3□□□□□ -1.24
SOX1O00570 NMNAT1P5-201ENST00000559657 841 ntBASIC7.3□□□□□ -1.24
SOX1O00570 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC7.3□□□□□ -1.24
SOX1O00570 AC092718.4-201ENST00000566639 716 ntBASIC7.3□□□□□ -1.24
SOX1O00570 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC7.3□□□□□ -1.24
SOX1O00570 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC7.3□□□□□ -1.24
SOX1O00570 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC7.3□□□□□ -1.24
SOX1O00570 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC7.3□□□□□ -1.24
SOX1O00570 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.3□□□□□ -1.24
SOX1O00570 WISP1-OT1-201ENST00000602893 642 ntBASIC7.3□□□□□ -1.24
SOX1O00570 AC006270.3-201ENST00000605967 1036 ntBASIC7.3□□□□□ -1.24
SOX1O00570 AL513218.1-201ENST00000606527 391 ntBASIC7.3□□□□□ -1.24
SOX1O00570 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC7.3□□□□□ -1.24
SOX1O00570 AC092266.1-201ENST00000610958 165 ntBASIC7.3□□□□□ -1.24
SOX1O00570 AC010678.1-201ENST00000614118 713 ntBASIC7.3□□□□□ -1.24
SOX1O00570 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC7.3□□□□□ -1.24
SOX1O00570 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC7.3□□□□□ -1.24
SOX1O00570 AC018445.2-201ENST00000622987 260 ntBASIC7.3□□□□□ -1.24
SOX1O00570 AL356596.1-201ENST00000624230 379 ntBASIC7.3□□□□□ -1.24
SOX1O00570 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC7.3□□□□□ -1.24
SOX1O00570 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC7.3□□□□□ -1.24
SOX1O00570 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
SOX1O00570 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC7.3□□□□□ -1.24
SOX1O00570 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.3□□□□□ -1.24
SOX1O00570 MYT1L-AS1-202ENST00000448106 3230 ntTSL 2 BASIC7.3□□□□□ -1.24
SOX1O00570 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SOX1O00570 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SOX1O00570 APP-209ENST00000440126 2846 ntTSL 2 BASIC7.3□□□□□ -1.24
SOX1O00570 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
SOX1O00570 NEPNP-201ENST00000404786 1371 ntBASIC7.3□□□□□ -1.24
SOX1O00570 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SOX1O00570 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC7.3□□□□□ -1.24
SOX1O00570 SLC22A10-201ENST00000332793 2026 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SOX1O00570 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SOX1O00570 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
SOX1O00570 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SOX1O00570 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SOX1O00570 AC090132.1-201ENST00000524071 1480 ntBASIC7.3□□□□□ -1.24
SOX1O00570 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC7.3□□□□□ -1.24
SOX1O00570 SLC4A4-203ENST00000351898 3771 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
SOX1O00570 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SOX1O00570 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
SOX1O00570 EGFLAM-AS4-201ENST00000512496 1579 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SOX1O00570 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
SOX1O00570 AL096816.1-201ENST00000623300 2920 ntBASIC7.29□□□□□ -1.24
SOX1O00570 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SOX1O00570 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC7.29□□□□□ -1.24
SOX1O00570 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.29□□□□□ -1.24
SOX1O00570 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC7.29□□□□□ -1.24
SOX1O00570 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SOX1O00570 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SOX1O00570 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SOX1O00570 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
SOX1O00570 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SOX1O00570 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SOX1O00570 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SOX1O00570 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
SOX1O00570 SUGT1P2-201ENST00000379452 992 ntBASIC7.29□□□□□ -1.24
SOX1O00570 SNORA51.9-201ENST00000384295 124 ntBASIC7.29□□□□□ -1.24
SOX1O00570 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
SOX1O00570 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC7.29□□□□□ -1.24
SOX1O00570 OSTCP4-201ENST00000424397 449 ntBASIC7.29□□□□□ -1.24
SOX1O00570 UQCRHP1-204ENST00000424609 274 ntBASIC7.29□□□□□ -1.24
SOX1O00570 IPMKP1-201ENST00000425988 855 ntBASIC7.29□□□□□ -1.24
SOX1O00570 AL359076.1-201ENST00000426860 420 ntTSL 3 BASIC7.29□□□□□ -1.24
SOX1O00570 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC7.29□□□□□ -1.24
SOX1O00570 AL121776.1-201ENST00000429337 372 ntBASIC7.29□□□□□ -1.24
SOX1O00570 LSM3P3-201ENST00000436601 306 ntBASIC7.29□□□□□ -1.24
SOX1O00570 AC098614.3-201ENST00000438957 440 ntBASIC7.29□□□□□ -1.24
SOX1O00570 GTF3AP5-201ENST00000442645 697 ntBASIC7.29□□□□□ -1.24
SOX1O00570 COX6CP2-201ENST00000444980 225 ntBASIC7.29□□□□□ -1.24
SOX1O00570 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms