Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.51□□□□□ -1.53
PDLIM1O00151 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.51□□□□□ -1.53
PDLIM1O00151 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.51□□□□□ -1.53
PDLIM1O00151 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.51□□□□□ -1.53
PDLIM1O00151 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.51□□□□□ -1.53
PDLIM1O00151 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.51□□□□□ -1.53
PDLIM1O00151 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.51□□□□□ -1.53
PDLIM1O00151 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.51□□□□□ -1.53
PDLIM1O00151 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.51□□□□□ -1.53
PDLIM1O00151 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDLIM1O00151 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
PDLIM1O00151 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDLIM1O00151 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.51□□□□□ -1.53
PDLIM1O00151 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.51□□□□□ -1.53
PDLIM1O00151 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDLIM1O00151 AL731532.2-201ENST00000623542 1953 ntBASIC5.51□□□□□ -1.53
PDLIM1O00151 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PDLIM1O00151 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.51□□□□□ -1.53
PDLIM1O00151 AL034370.1-201ENST00000397254 1590 ntBASIC5.5□□□□□ -1.53
PDLIM1O00151 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PDLIM1O00151 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
PDLIM1O00151 AC005005.4-201ENST00000623789 16698 ntBASIC5.5□□□□□ -1.53
PDLIM1O00151 AC120338.1-201ENST00000625074 1541 ntBASIC5.5□□□□□ -1.53
PDLIM1O00151 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PDLIM1O00151 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PDLIM1O00151 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.5□□□□□ -1.53
PDLIM1O00151 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
PDLIM1O00151 RNU1-65P-201ENST00000363919 148 ntBASIC5.5□□□□□ -1.53
PDLIM1O00151 RNU105B-201ENST00000364478 208 ntBASIC5.5□□□□□ -1.53
PDLIM1O00151 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
PDLIM1O00151 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PDLIM1O00151 MIR1271-201ENST00000408537 86 ntBASIC5.5□□□□□ -1.53
PDLIM1O00151 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.5□□□□□ -1.53
PDLIM1O00151 OR6C71P-201ENST00000432580 913 ntBASIC5.5□□□□□ -1.53
PDLIM1O00151 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.5□□□□□ -1.53
PDLIM1O00151 RPL5P7-201ENST00000444235 813 ntBASIC5.5□□□□□ -1.53
PDLIM1O00151 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PDLIM1O00151 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.5□□□□□ -1.53
PDLIM1O00151 AC019084.1-201ENST00000457337 432 ntBASIC5.5□□□□□ -1.53
PDLIM1O00151 RN7SL254P-201ENST00000460609 284 ntBASIC5.5□□□□□ -1.53
PDLIM1O00151 RPL12P30-201ENST00000488389 499 ntBASIC5.5□□□□□ -1.53
PDLIM1O00151 AC122718.2-201ENST00000505325 591 ntBASIC5.5□□□□□ -1.53
PDLIM1O00151 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.5□□□□□ -1.53
PDLIM1O00151 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.5□□□□□ -1.53
PDLIM1O00151 Vault.2-201ENST00000516519 98 ntBASIC5.5□□□□□ -1.53
PDLIM1O00151 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.5□□□□□ -1.53
PDLIM1O00151 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.5□□□□□ -1.53
PDLIM1O00151 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.5□□□□□ -1.53
PDLIM1O00151 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.5□□□□□ -1.53
PDLIM1O00151 AC026826.3-201ENST00000561747 158 ntBASIC5.5□□□□□ -1.53
PDLIM1O00151 AC127024.5-201ENST00000580085 462 ntBASIC5.5□□□□□ -1.53
PDLIM1O00151 AP005136.2-201ENST00000583253 1049 ntBASIC5.5□□□□□ -1.53
PDLIM1O00151 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.5□□□□□ -1.53
PDLIM1O00151 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.5□□□□□ -1.53
PDLIM1O00151 AP001542.1-201ENST00000591314 200 ntBASIC5.5□□□□□ -1.53
PDLIM1O00151 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.5□□□□□ -1.53
PDLIM1O00151 AP001823.1-201ENST00000604056 1003 ntBASIC5.5□□□□□ -1.53
PDLIM1O00151 AC124916.2-201ENST00000604416 224 ntBASIC5.5□□□□□ -1.53
PDLIM1O00151 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.5□□□□□ -1.53
PDLIM1O00151 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.5□□□□□ -1.53
PDLIM1O00151 MIR7109-201ENST00000613748 65 ntBASIC5.5□□□□□ -1.53
PDLIM1O00151 AC087821.1-201ENST00000623639 567 ntBASIC5.5□□□□□ -1.53
PDLIM1O00151 AC073488.6-201ENST00000632293 754 ntBASIC5.5□□□□□ -1.53
PDLIM1O00151 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.5□□□□□ -1.53
PDLIM1O00151 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDLIM1O00151 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.5□□□□□ -1.53
PDLIM1O00151 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PDLIM1O00151 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.5□□□□□ -1.53
PDLIM1O00151 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDLIM1O00151 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDLIM1O00151 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.5□□□□□ -1.53
PDLIM1O00151 HSPA8P18-201ENST00000439846 1928 ntBASIC5.5□□□□□ -1.53
PDLIM1O00151 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
PDLIM1O00151 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
PDLIM1O00151 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
PDLIM1O00151 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM1O00151 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM1O00151 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM1O00151 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM1O00151 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
PDLIM1O00151 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM1O00151 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM1O00151 MTHFD2P5-201ENST00000320415 844 ntBASIC5.49□□□□□ -1.53
PDLIM1O00151 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PDLIM1O00151 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM1O00151 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PDLIM1O00151 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PDLIM1O00151 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PDLIM1O00151 RPL11P3-201ENST00000395256 523 ntBASIC5.49□□□□□ -1.53
PDLIM1O00151 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM1O00151 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.49□□□□□ -1.53
PDLIM1O00151 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.49□□□□□ -1.53
PDLIM1O00151 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.49□□□□□ -1.53
PDLIM1O00151 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.49□□□□□ -1.53
PDLIM1O00151 RPL24P2-201ENST00000421023 475 ntBASIC5.49□□□□□ -1.53
PDLIM1O00151 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.49□□□□□ -1.53
PDLIM1O00151 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.49□□□□□ -1.53
PDLIM1O00151 MTCO3P17-201ENST00000443775 513 ntBASIC5.49□□□□□ -1.53
PDLIM1O00151 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PDLIM1O00151 HMGB1P7-201ENST00000450921 612 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms