Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 CXADRP3-202ENST00000617265 1100 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 AP001002.2-201ENST00000625137 386 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 AP001153.1-201ENST00000641024 338 ntBASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TCRBV7S3A2A0A539 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 AC005261.6-201ENST00000623072 1387 ntBASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 AC006206.1-201ENST00000544842 3387 ntBASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 TMSB4XP2-201ENST00000335179 210 ntBASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 RN7SKP184-201ENST00000362348 333 ntBASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 RNU6-40P-201ENST00000384254 107 ntBASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 PTGES3P2-201ENST00000407942 482 ntBASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 VN1R21P-201ENST00000426703 765 ntBASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 AC138761.5-201ENST00000433967 325 ntBASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 MTND2P40-201ENST00000436718 841 ntBASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 SUMO2P1-206ENST00000445436 284 ntBASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 RPL5P12-201ENST00000477071 851 ntBASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 AC111000.6-201ENST00000514471 709 ntBASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 CKS1BP1-201ENST00000555221 240 ntBASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 RPA2P1-201ENST00000556557 721 ntBASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 AC005776.1-201ENST00000603164 290 ntBASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 KATNBL1P5-201ENST00000605015 517 ntBASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 AL445493.3-201ENST00000619568 477 ntBASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 AC023510.2-201ENST00000622162 746 ntBASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TCRBV7S3A2A0A539 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
TCRBV7S3A2A0A539 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
TCRBV7S3A2A0A539 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
TCRBV7S3A2A0A539 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
TCRBV7S3A2A0A539 AC027088.4-201ENST00000611559 1947 ntBASIC5.84□□□□□ -1.48
TCRBV7S3A2A0A539 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 AC093225.1-201ENST00000506867 1408 ntBASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 AC010329.1-201ENST00000593903 8328 ntBASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 OR10AB1P-202ENST00000641219 1686 ntBASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 AC005042.1-201ENST00000393397 800 ntBASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 AL356057.1-202ENST00000402263 756 ntBASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 MIR1275-201ENST00000408770 80 ntBASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 RNGTTP1-201ENST00000420965 728 ntBASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 Z99127.2-201ENST00000441426 334 ntBASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 LDHBP2-201ENST00000456969 1005 ntBASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 AC104849.1-201ENST00000462623 405 ntBASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 AC022336.1-201ENST00000475510 337 ntBASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 AC093763.2-201ENST00000505334 1223 ntBASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.83□□□□□ -1.48
TCRBV7S3A2A0A539 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms