Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 OR7E10P-201ENST00000526420 991 ntBASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 RPA2P3-201ENST00000533268 770 ntBASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 AL158211.1-201ENST00000566763 763 ntBASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 COX6CP7-201ENST00000597056 208 ntBASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 AC109309.2-201ENST00000612597 332 ntBASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 AC016597.2-201ENST00000613256 341 ntBASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 AL136228.1-201ENST00000622221 319 ntBASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 GUCY1B2-204ENST00000531898 1979 ntBASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 AC120036.2-201ENST00000509729 1474 ntBASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.53□□□□□ -1.36
SSX2IPQ9Y2D8 AF287957.1-201ENST00000607368 1595 ntBASIC6.52□□□□□ -1.36
SSX2IPQ9Y2D8 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 MTCO1P11-201ENST00000429111 1528 ntBASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 MIR433-201ENST00000384837 93 ntBASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 AL392003.1-201ENST00000434394 243 ntBASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 AL512605.1-202ENST00000441919 381 ntBASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 AL359955.2-201ENST00000445380 353 ntBASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 AL445466.1-201ENST00000448432 357 ntBASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 RN7SL273P-201ENST00000481561 299 ntBASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 AC114728.1-201ENST00000488289 483 ntBASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 AC138701.1-201ENST00000524329 714 ntBASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 AC120053.1-201ENST00000607706 736 ntBASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 AC097504.2-201ENST00000608088 454 ntBASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 MSL3P1-202ENST00000440028 1468 ntBASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 AC091305.2-201ENST00000624049 1576 ntBASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 AC105749.1-201ENST00000631338 2008 ntBASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SSX2IPQ9Y2D8 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 AC012078.1-201ENST00000405035 1646 ntBASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 AC116036.1-201ENST00000412199 367 ntBASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 NDUFS5P5-201ENST00000437256 321 ntBASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 EIF2S2P4-201ENST00000461070 984 ntBASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 NPM1P27-201ENST00000502784 830 ntBASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 AC093815.1-201ENST00000508637 280 ntBASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 AC114781.3-201ENST00000512083 142 ntBASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 NPM1P21-201ENST00000513394 762 ntBASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 OR56A7P-201ENST00000524865 941 ntBASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC6.51□□□□□ -1.37
SSX2IPQ9Y2D8 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms