Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC9.09□□□□□ -0.95
PDZRN3Q9UPQ7 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 U3.4-201ENST00000363352 213 ntBASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 Y_RNA.144-201ENST00000363521 113 ntBASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 Y_RNA.295-201ENST00000364918 102 ntBASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 Y_RNA.560-201ENST00000384689 102 ntBASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 GGA1-205ENST00000405147 575 ntTSL 4 BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 MIR1204-201ENST00000408388 67 ntBASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 RPLP1P10-201ENST00000413972 339 ntBASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 HSPD1P12-201ENST00000429127 1069 ntBASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 LINC00328-2P-201ENST00000436585 219 ntBASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 FGF7P5-201ENST00000441829 291 ntBASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 AL031681.1-201ENST00000443304 400 ntBASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 AL034369.1-201ENST00000453808 477 ntBASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 CABYRP1-201ENST00000465493 1045 ntBASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 OR9N1P-201ENST00000491296 333 ntBASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 IGBP1P4-201ENST00000503202 879 ntBASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 AL355836.1-201ENST00000555951 870 ntBASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 AC015801.1-201ENST00000585651 153 ntBASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 AC097381.3-201ENST00000608962 462 ntBASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 AL132796.3-201ENST00000624703 900 ntBASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 AC090771.1-201ENST00000585803 1618 ntBASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC9.08□□□□□ -0.96
PDZRN3Q9UPQ7 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
PDZRN3Q9UPQ7 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
PDZRN3Q9UPQ7 SGO1P2-201ENST00000429458 1589 ntBASIC9.07□□□□□ -0.96
PDZRN3Q9UPQ7 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
PDZRN3Q9UPQ7 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
PDZRN3Q9UPQ7 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
PDZRN3Q9UPQ7 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
PDZRN3Q9UPQ7 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC9.07□□□□□ -0.96
PDZRN3Q9UPQ7 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
PDZRN3Q9UPQ7 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
PDZRN3Q9UPQ7 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
PDZRN3Q9UPQ7 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
PDZRN3Q9UPQ7 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC9.07□□□□□ -0.96
PDZRN3Q9UPQ7 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC9.07□□□□□ -0.96
PDZRN3Q9UPQ7 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC9.07□□□□□ -0.96
PDZRN3Q9UPQ7 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
PDZRN3Q9UPQ7 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
PDZRN3Q9UPQ7 Y_RNA.263-201ENST00000364659 114 ntBASIC9.07□□□□□ -0.96
PDZRN3Q9UPQ7 RN7SKP55-201ENST00000364888 307 ntBASIC9.07□□□□□ -0.96
PDZRN3Q9UPQ7 MIR152-201ENST00000385212 87 ntBASIC9.07□□□□□ -0.96
PDZRN3Q9UPQ7 AL031577.2-201ENST00000404133 280 ntBASIC9.07□□□□□ -0.96
PDZRN3Q9UPQ7 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC9.07□□□□□ -0.96
PDZRN3Q9UPQ7 Z86062.1-201ENST00000406773 777 ntBASIC9.07□□□□□ -0.96
PDZRN3Q9UPQ7 RN7SKP91-201ENST00000410852 288 ntBASIC9.07□□□□□ -0.96
PDZRN3Q9UPQ7 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC9.07□□□□□ -0.96
PDZRN3Q9UPQ7 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC9.07□□□□□ -0.96
PDZRN3Q9UPQ7 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC9.07□□□□□ -0.96
PDZRN3Q9UPQ7 TNPO1P1-201ENST00000423641 1138 ntBASIC9.07□□□□□ -0.96
PDZRN3Q9UPQ7 AC002069.1-201ENST00000429649 1159 ntBASIC9.07□□□□□ -0.96
PDZRN3Q9UPQ7 UBE2V1P3-201ENST00000439651 417 ntBASIC9.07□□□□□ -0.96
PDZRN3Q9UPQ7 EEF1A1P39-201ENST00000440791 250 ntBASIC9.07□□□□□ -0.96
PDZRN3Q9UPQ7 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC9.07□□□□□ -0.96
PDZRN3Q9UPQ7 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC9.07□□□□□ -0.96
PDZRN3Q9UPQ7 AL583843.1-201ENST00000456070 346 ntBASIC9.07□□□□□ -0.96
PDZRN3Q9UPQ7 RPSAP37-201ENST00000470913 821 ntBASIC9.07□□□□□ -0.96
PDZRN3Q9UPQ7 RPS12P31-201ENST00000491419 398 ntBASIC9.07□□□□□ -0.96
PDZRN3Q9UPQ7 AL024509.2-201ENST00000493462 493 ntBASIC9.07□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms