Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 AC139365.2-201ENST00000517972 253 ntBASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 MED31-202ENST00000574128 619 ntTSL 3 BASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 MIR4311-201ENST00000580794 100 ntBASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 AL589765.6-201ENST00000601909 549 ntBASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 AL512413.1-201ENST00000606489 382 ntBASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 AP000648.2-201ENST00000624182 404 ntBASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 AC012078.1-201ENST00000405035 1646 ntBASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 AC233968.1-201ENST00000611212 1300 ntBASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 AL031595.2-201ENST00000624215 19071 ntBASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 AC097063.1-201ENST00000426714 1797 ntBASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 AC068870.3-201ENST00000625077 2536 ntBASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 RNU1-134P-201ENST00000362935 165 ntBASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 AL050305.1-201ENST00000399993 1230 ntBASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 OR6R1P-201ENST00000431838 940 ntBASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 TUBB4BP6-201ENST00000437576 479 ntBASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 AL158214.1-201ENST00000444423 404 ntBASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 RPL15P21-201ENST00000495592 567 ntBASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 AC084121.1-201ENST00000533882 835 ntBASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 RFPL4AP6-201ENST00000616792 846 ntBASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 AC022106.2-201ENST00000620114 757 ntBASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 MIR6839-201ENST00000620425 113 ntBASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 AP003108.4-201ENST00000623917 878 ntBASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.68□□□□□ -1.5
VIPAS39Q9H9C1 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VIPAS39Q9H9C1 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.67□□□□□ -1.5
VIPAS39Q9H9C1 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.67□□□□□ -1.5
VIPAS39Q9H9C1 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VIPAS39Q9H9C1 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.67□□□□□ -1.5
VIPAS39Q9H9C1 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
VIPAS39Q9H9C1 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.67□□□□□ -1.5
VIPAS39Q9H9C1 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
VIPAS39Q9H9C1 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
VIPAS39Q9H9C1 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.67□□□□□ -1.5
VIPAS39Q9H9C1 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
VIPAS39Q9H9C1 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VIPAS39Q9H9C1 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VIPAS39Q9H9C1 GAPDHP24-201ENST00000328713 983 ntBASIC5.67□□□□□ -1.5
VIPAS39Q9H9C1 RPL11P4-201ENST00000332269 436 ntBASIC5.67□□□□□ -1.5
VIPAS39Q9H9C1 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VIPAS39Q9H9C1 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.67□□□□□ -1.5
VIPAS39Q9H9C1 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
VIPAS39Q9H9C1 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VIPAS39Q9H9C1 RNA5SP429-201ENST00000363688 109 ntBASIC5.67□□□□□ -1.5
VIPAS39Q9H9C1 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
VIPAS39Q9H9C1 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.67□□□□□ -1.5
VIPAS39Q9H9C1 OOSP1-201ENST00000398992 1270 ntBASIC5.67□□□□□ -1.5
VIPAS39Q9H9C1 AC046176.1-201ENST00000435260 1170 ntBASIC5.67□□□□□ -1.5
VIPAS39Q9H9C1 PSMD8P1-201ENST00000436275 769 ntBASIC5.67□□□□□ -1.5
VIPAS39Q9H9C1 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.67□□□□□ -1.5
VIPAS39Q9H9C1 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms