Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
CHMP4CQ96CF2 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 MTHFD2P5-201ENST00000320415 844 ntBASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 SNORA21-201ENST00000362423 132 ntBASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 AL354890.1-201ENST00000413730 346 ntBASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 CDY17P-201ENST00000414121 1282 ntBASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 AL121882.1-201ENST00000422893 417 ntBASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 CDY8P-201ENST00000428380 1279 ntBASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 AC079807.1-201ENST00000429993 481 ntBASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 AC097463.1-201ENST00000447288 481 ntBASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 CDY20P-201ENST00000447528 1279 ntBASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 AC002553.3-201ENST00000453002 341 ntBASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 NPM1P28-201ENST00000492269 840 ntBASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 IGLVIV-66-1-201ENST00000521832 460 ntBASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 AC008555.7-201ENST00000605008 583 ntBASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 KATNBL1P5-201ENST00000605015 517 ntBASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 AL356608.1-201ENST00000610034 820 ntBASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 AL136097.3-201ENST00000611097 505 ntBASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 AC022400.9-201ENST00000623633 273 ntBASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 SNX18P12-201ENST00000624821 759 ntBASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 NLN-202ENST00000502464 8354 ntTSL 5 BASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
CHMP4CQ96CF2 HSPD1P9-201ENST00000420325 1636 ntBASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 RNFT1P3-201ENST00000340898 1052 ntBASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 MYL6P5-201ENST00000412707 459 ntBASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 PTCD2P2-201ENST00000415579 1095 ntBASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 RPS7P8-201ENST00000418311 581 ntBASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 AC019205.1-201ENST00000421830 730 ntBASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 HSFY7P-201ENST00000432672 318 ntBASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 AL606490.7-201ENST00000433136 191 ntBASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 HSFY8P-201ENST00000437934 318 ntBASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 Z99127.2-201ENST00000441426 334 ntBASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 HSFY5P-201ENST00000453726 309 ntBASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 AP000547.1-201ENST00000454360 617 ntBASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 AC093663.2-201ENST00000484625 313 ntBASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 RNA5SP434-201ENST00000516647 121 ntBASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 TRIM51DP-201ENST00000529746 596 ntBASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 OLR1-210ENST00000544577 924 ntTSL 5 BASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 AL121839.1-201ENST00000556233 1185 ntBASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 AC093510.2-201ENST00000562820 896 ntBASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 AL391001.1-201ENST00000602747 715 ntBASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 AP006248.3-201ENST00000623580 594 ntBASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC7.19□□□□□ -1.26
CHMP4CQ96CF2 MVP-219ENST00000629059 120 ntTSL 5 BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms