Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 RNF10P1-201ENST00000418589 369 ntBASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 AC110602.1-201ENST00000437414 318 ntBASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 RPS23P2-201ENST00000463671 415 ntBASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 RN7SL57P-201ENST00000493687 290 ntBASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 OR5H7P-201ENST00000514084 930 ntBASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 CETN3-206ENST00000522864 738 ntTSL 3 BASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 PCNAP4-201ENST00000532690 730 ntBASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 AC010632.3-201ENST00000611377 369 ntBASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 AC241377.1-201ENST00000619797 406 ntBASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 PDZK1P1-202ENST00000425209 1350 ntBASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 AC005261.6-201ENST00000623072 1387 ntBASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 AC112198.2-201ENST00000426589 6996 ntBASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 RNA5SP273-201ENST00000362484 113 ntBASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 RNA5SP477-201ENST00000362639 119 ntBASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 SUGT1P2-201ENST00000379452 992 ntBASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 AC005042.1-201ENST00000393397 800 ntBASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 SEPT7P2-202ENST00000398921 823 ntBASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 AC096921.1-201ENST00000411661 375 ntBASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 AC126120.1-201ENST00000431082 470 ntBASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 EIF5AP4-201ENST00000441206 465 ntBASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 UBE2V2P4-201ENST00000447495 259 ntBASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 NPM1P28-201ENST00000492269 840 ntBASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 DUTP1-201ENST00000493631 470 ntBASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 Y_RNA.667-201ENST00000516212 107 ntBASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 BCAS2P1-201ENST00000528022 632 ntBASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 TOMM20P1-201ENST00000534518 427 ntBASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 AC006530.1-201ENST00000555980 571 ntBASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 AL356801.1-201ENST00000559320 294 ntBASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 DHFRP1-201ENST00000579682 559 ntBASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 MIR7853-201ENST00000584820 132 ntBASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 COX6CP7-201ENST00000597056 208 ntBASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 Six3os1_2.1-201ENST00000616963 217 ntBASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 LINC02019-201ENST00000608605 2060 ntBASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 MAPK10-338ENST00000641647 3362 ntBASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.72□□□□□ -1.65
RTN4IP1Q8WWV3 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms