Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL162456.1-201ENST00000634535 2006 ntBASIC6.74□□□□□ -1.33
SNED1Q8TER0 MIR141-201ENST00000384975 95 ntBASIC6.74□□□□□ -1.33
SNED1Q8TER0 RNA5SP91-201ENST00000390902 119 ntBASIC6.74□□□□□ -1.33
SNED1Q8TER0 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.74□□□□□ -1.33
SNED1Q8TER0 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.74□□□□□ -1.33
SNED1Q8TER0 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.74□□□□□ -1.33
SNED1Q8TER0 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.74□□□□□ -1.33
SNED1Q8TER0 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.74□□□□□ -1.33
SNED1Q8TER0 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.74□□□□□ -1.33
SNED1Q8TER0 AC083982.1-201ENST00000485679 344 ntBASIC6.74□□□□□ -1.33
SNED1Q8TER0 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.74□□□□□ -1.33
SNED1Q8TER0 AGGF1P7-201ENST00000562369 913 ntBASIC6.74□□□□□ -1.33
SNED1Q8TER0 AC114947.2-201ENST00000565748 2125 ntBASIC6.74□□□□□ -1.33
SNED1Q8TER0 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC6.74□□□□□ -1.33
SNED1Q8TER0 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.74□□□□□ -1.33
SNED1Q8TER0 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.74□□□□□ -1.33
SNED1Q8TER0 AP004607.3-201ENST00000530354 3915 ntBASIC6.74□□□□□ -1.33
SNED1Q8TER0 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SNED1Q8TER0 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
SNED1Q8TER0 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SNED1Q8TER0 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
SNED1Q8TER0 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SNED1Q8TER0 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.74□□□□□ -1.33
SNED1Q8TER0 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SNED1Q8TER0 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SNED1Q8TER0 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.73□□□□□ -1.33
SNED1Q8TER0 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.73□□□□□ -1.33
SNED1Q8TER0 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.73□□□□□ -1.33
SNED1Q8TER0 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
SNED1Q8TER0 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.73□□□□□ -1.33
SNED1Q8TER0 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
SNED1Q8TER0 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SNED1Q8TER0 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.73□□□□□ -1.33
SNED1Q8TER0 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.73□□□□□ -1.33
SNED1Q8TER0 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SNED1Q8TER0 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SNED1Q8TER0 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.73□□□□□ -1.33
SNED1Q8TER0 FAM96AP1-201ENST00000430879 482 ntBASIC6.73□□□□□ -1.33
SNED1Q8TER0 AL049745.1-201ENST00000433953 286 ntBASIC6.73□□□□□ -1.33
SNED1Q8TER0 AL772161.1-201ENST00000439130 476 ntBASIC6.73□□□□□ -1.33
SNED1Q8TER0 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.73□□□□□ -1.33
SNED1Q8TER0 RN7SL346P-201ENST00000491561 294 ntBASIC6.73□□□□□ -1.33
SNED1Q8TER0 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.73□□□□□ -1.33
SNED1Q8TER0 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.73□□□□□ -1.33
SNED1Q8TER0 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.73□□□□□ -1.33
SNED1Q8TER0 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.73□□□□□ -1.33
SNED1Q8TER0 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.73□□□□□ -1.33
SNED1Q8TER0 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.73□□□□□ -1.33
SNED1Q8TER0 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.73□□□□□ -1.33
SNED1Q8TER0 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SNED1Q8TER0 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SNED1Q8TER0 AC018765.1-201ENST00000623357 3446 ntBASIC6.72□□□□□ -1.33
SNED1Q8TER0 AC023632.6-201ENST00000624338 2177 ntBASIC6.72□□□□□ -1.33
SNED1Q8TER0 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SNED1Q8TER0 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SNED1Q8TER0 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
SNED1Q8TER0 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.72□□□□□ -1.33
SNED1Q8TER0 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SNED1Q8TER0 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SNED1Q8TER0 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SNED1Q8TER0 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
SNED1Q8TER0 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
SNED1Q8TER0 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.72□□□□□ -1.33
SNED1Q8TER0 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC6.72□□□□□ -1.33
SNED1Q8TER0 RPL21P133-201ENST00000443666 476 ntBASIC6.72□□□□□ -1.33
SNED1Q8TER0 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.72□□□□□ -1.33
SNED1Q8TER0 AL596266.1-201ENST00000448132 400 ntBASIC6.72□□□□□ -1.33
SNED1Q8TER0 AC009220.1-201ENST00000451614 275 ntBASIC6.72□□□□□ -1.33
SNED1Q8TER0 RPS29P33-201ENST00000456717 146 ntBASIC6.72□□□□□ -1.33
SNED1Q8TER0 RPL37AP8-201ENST00000494116 276 ntBASIC6.72□□□□□ -1.33
SNED1Q8TER0 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.72□□□□□ -1.33
SNED1Q8TER0 RNA5SP373-201ENST00000517271 95 ntBASIC6.72□□□□□ -1.33
SNED1Q8TER0 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.72□□□□□ -1.33
SNED1Q8TER0 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.72□□□□□ -1.33
SNED1Q8TER0 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.72□□□□□ -1.33
SNED1Q8TER0 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.72□□□□□ -1.33
SNED1Q8TER0 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.72□□□□□ -1.33
SNED1Q8TER0 AC018552.1-201ENST00000562099 811 ntBASIC6.72□□□□□ -1.33
SNED1Q8TER0 AL163952.1-202ENST00000569625 600 ntBASIC6.72□□□□□ -1.33
SNED1Q8TER0 AC011447.4-201ENST00000587562 111 ntBASIC6.72□□□□□ -1.33
SNED1Q8TER0 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.72□□□□□ -1.33
SNED1Q8TER0 AC095055.1-201ENST00000603472 1113 ntBASIC6.72□□□□□ -1.33
SNED1Q8TER0 NANOGP3-201ENST00000605855 286 ntBASIC6.72□□□□□ -1.33
SNED1Q8TER0 MIR7703-201ENST00000620784 77 ntBASIC6.72□□□□□ -1.33
SNED1Q8TER0 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.72□□□□□ -1.33
SNED1Q8TER0 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.72□□□□□ -1.33
SNED1Q8TER0 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC6.72□□□□□ -1.33
SNED1Q8TER0 AC119674.1-217ENST00000641942 1086 ntBASIC6.72□□□□□ -1.33
SNED1Q8TER0 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SNED1Q8TER0 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SNED1Q8TER0 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.72□□□□□ -1.33
SNED1Q8TER0 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SNED1Q8TER0 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.72□□□□□ -1.33
SNED1Q8TER0 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
SNED1Q8TER0 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
SNED1Q8TER0 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SNED1Q8TER0 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
SNED1Q8TER0 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
SNED1Q8TER0 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.71□□□□□ -1.33
SNED1Q8TER0 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.71□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms