Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
VPS8Q8N3P4 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC8.54□□□□□ -1.04
VPS8Q8N3P4 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
VPS8Q8N3P4 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
VPS8Q8N3P4 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC8.54□□□□□ -1.04
VPS8Q8N3P4 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
VPS8Q8N3P4 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
VPS8Q8N3P4 AC006600.2-201ENST00000624834 2506 ntBASIC8.54□□□□□ -1.04
VPS8Q8N3P4 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC8.54□□□□□ -1.04
VPS8Q8N3P4 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
VPS8Q8N3P4 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
VPS8Q8N3P4 PPIAP9-201ENST00000403866 498 ntBASIC8.54□□□□□ -1.04
VPS8Q8N3P4 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC8.54□□□□□ -1.04
VPS8Q8N3P4 AC021876.1-201ENST00000425959 359 ntBASIC8.54□□□□□ -1.04
VPS8Q8N3P4 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC8.54□□□□□ -1.04
VPS8Q8N3P4 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC8.54□□□□□ -1.04
VPS8Q8N3P4 RN7SKP99-201ENST00000517028 307 ntBASIC8.54□□□□□ -1.04
VPS8Q8N3P4 ASB8-215ENST00000540782 659 ntTSL 3 BASIC8.54□□□□□ -1.04
VPS8Q8N3P4 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC8.54□□□□□ -1.04
VPS8Q8N3P4 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC8.54□□□□□ -1.04
VPS8Q8N3P4 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC8.54□□□□□ -1.04
VPS8Q8N3P4 AL139124.1-201ENST00000609123 421 ntBASIC8.54□□□□□ -1.04
VPS8Q8N3P4 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC8.54□□□□□ -1.04
VPS8Q8N3P4 AC021422.1-201ENST00000621212 473 ntBASIC8.54□□□□□ -1.04
VPS8Q8N3P4 AC005618.4-201ENST00000625053 554 ntBASIC8.54□□□□□ -1.04
VPS8Q8N3P4 OR55B1P-203ENST00000641518 2602 ntBASIC8.54□□□□□ -1.04
VPS8Q8N3P4 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC8.53□□□□□ -1.04
VPS8Q8N3P4 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
VPS8Q8N3P4 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC8.53□□□□□ -1.04
VPS8Q8N3P4 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC8.53□□□□□ -1.04
VPS8Q8N3P4 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC8.53□□□□□ -1.04
VPS8Q8N3P4 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
VPS8Q8N3P4 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC8.53□□□□□ -1.04
VPS8Q8N3P4 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
VPS8Q8N3P4 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
VPS8Q8N3P4 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC8.53□□□□□ -1.04
VPS8Q8N3P4 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC8.53□□□□□ -1.04
VPS8Q8N3P4 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
VPS8Q8N3P4 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC8.53□□□□□ -1.04
VPS8Q8N3P4 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
VPS8Q8N3P4 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
VPS8Q8N3P4 U3.28-201ENST00000391249 210 ntBASIC8.53□□□□□ -1.04
VPS8Q8N3P4 RN7SKP273-201ENST00000411392 314 ntBASIC8.53□□□□□ -1.04
VPS8Q8N3P4 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC8.53□□□□□ -1.04
VPS8Q8N3P4 AL133325.1-201ENST00000421090 382 ntBASIC8.53□□□□□ -1.04
VPS8Q8N3P4 RPL7L1P9-201ENST00000431298 745 ntBASIC8.53□□□□□ -1.04
VPS8Q8N3P4 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC8.53□□□□□ -1.04
VPS8Q8N3P4 AC073465.2-201ENST00000440938 498 ntBASIC8.53□□□□□ -1.04
VPS8Q8N3P4 SUMO2P19-201ENST00000518920 295 ntBASIC8.53□□□□□ -1.04
VPS8Q8N3P4 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC8.53□□□□□ -1.04
VPS8Q8N3P4 BX323046.1-201ENST00000610145 535 ntBASIC8.53□□□□□ -1.04
VPS8Q8N3P4 AL352984.2-202ENST00000613699 155 ntBASIC8.53□□□□□ -1.04
VPS8Q8N3P4 AC021766.1-201ENST00000624404 741 ntBASIC8.53□□□□□ -1.04
VPS8Q8N3P4 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC8.53□□□□□ -1.04
VPS8Q8N3P4 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC8.52□□□□□ -1.04
VPS8Q8N3P4 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
VPS8Q8N3P4 AL078621.3-201ENST00000623707 2042 ntBASIC8.52□□□□□ -1.04
VPS8Q8N3P4 AC007938.2-201ENST00000604666 2634 ntBASIC8.52□□□□□ -1.05
VPS8Q8N3P4 AC114774.1-201ENST00000507410 1770 ntBASIC8.52□□□□□ -1.05
VPS8Q8N3P4 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
VPS8Q8N3P4 CR1-204ENST00000367052 7469 ntTSL 5 BASIC8.52□□□□□ -1.05
VPS8Q8N3P4 CR1-205ENST00000367053 7469 ntTSL 5 BASIC8.52□□□□□ -1.05
VPS8Q8N3P4 AL353796.1-201ENST00000561542 3241 ntBASIC8.52□□□□□ -1.05
VPS8Q8N3P4 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
VPS8Q8N3P4 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC8.52□□□□□ -1.05
VPS8Q8N3P4 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
VPS8Q8N3P4 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC8.52□□□□□ -1.05
VPS8Q8N3P4 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC8.52□□□□□ -1.05
VPS8Q8N3P4 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
VPS8Q8N3P4 AC027308.1-201ENST00000517993 110 ntBASIC8.52□□□□□ -1.05
VPS8Q8N3P4 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC8.52□□□□□ -1.05
VPS8Q8N3P4 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC8.52□□□□□ -1.05
VPS8Q8N3P4 AC069307.1-201ENST00000602820 447 ntBASIC8.52□□□□□ -1.05
VPS8Q8N3P4 MIR6719-201ENST00000622428 87 ntBASIC8.52□□□□□ -1.05
VPS8Q8N3P4 CYP4F35P-202ENST00000636121 390 ntBASIC8.52□□□□□ -1.05
VPS8Q8N3P4 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
VPS8Q8N3P4 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
VPS8Q8N3P4 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
VPS8Q8N3P4 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
VPS8Q8N3P4 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
VPS8Q8N3P4 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
VPS8Q8N3P4 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
VPS8Q8N3P4 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC8.51□□□□□ -1.05
VPS8Q8N3P4 AC005294.1-201ENST00000355509 281 ntBASIC8.51□□□□□ -1.05
VPS8Q8N3P4 RN7SKP145-201ENST00000363291 303 ntBASIC8.51□□□□□ -1.05
VPS8Q8N3P4 RNU1-149P-201ENST00000390870 161 ntBASIC8.51□□□□□ -1.05
VPS8Q8N3P4 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC8.51□□□□□ -1.05
VPS8Q8N3P4 BX276092.6-201ENST00000430476 250 ntBASIC8.51□□□□□ -1.05
VPS8Q8N3P4 MED28P3-201ENST00000444288 531 ntBASIC8.51□□□□□ -1.05
VPS8Q8N3P4 BX276092.8-201ENST00000455722 250 ntBASIC8.51□□□□□ -1.05
VPS8Q8N3P4 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC8.51□□□□□ -1.05
VPS8Q8N3P4 AC005532.2-201ENST00000467154 373 ntBASIC8.51□□□□□ -1.05
VPS8Q8N3P4 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC8.51□□□□□ -1.05
VPS8Q8N3P4 HIGD1AP14-201ENST00000507617 282 ntBASIC8.51□□□□□ -1.05
VPS8Q8N3P4 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC8.51□□□□□ -1.05
VPS8Q8N3P4 SCARNA16.4-201ENST00000516956 187 ntBASIC8.51□□□□□ -1.05
VPS8Q8N3P4 SCARNA20.4-201ENST00000516969 131 ntBASIC8.51□□□□□ -1.05
VPS8Q8N3P4 RNA5SP373-201ENST00000517271 95 ntBASIC8.51□□□□□ -1.05
VPS8Q8N3P4 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
VPS8Q8N3P4 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms