Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 KCTD9P5-201ENST00000504141 1170 ntBASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 MYL5-205ENST00000505477 584 ntTSL 3 BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 OR7E99P-201ENST00000505750 922 ntBASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 GNGT2-205ENST00000511673 500 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 AC104123.1-202ENST00000511775 581 ntTSL 4 BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 SNORA48.10-201ENST00000516965 160 ntBASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 RGS4-207ENST00000527809 817 ntTSL 4 BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 ZNF503-AS1-205ENST00000530606 549 ntTSL 4 BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 TMEM269-202ENST00000536543 983 ntAPPRIS P2 TSL 5 BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 EIF4EBP2P2-201ENST00000563883 333 ntBASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 AP005119.2-201ENST00000579735 1105 ntBASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 AC007998.3-202ENST00000591141 697 ntTSL 3 BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 AL157899.1-201ENST00000604110 936 ntBASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 ACACA-232ENST00000614438 569 ntTSL 2 BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 AL731556.2-201ENST00000615610 770 ntBASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 CU634019.6-201ENST00000623165 710 ntTSL 5 BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 YES1-203ENST00000577961 4554 ntTSL 5 BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 AL355488.2-201ENST00000609909 2850 ntBASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 AL591543.1-202ENST00000642095 4149 ntBASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 FARSBP1-201ENST00000435808 1778 ntBASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 FAM13A-205ENST00000503556 3386 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
DEPDC4Q8N2C3 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 AL512604.2-201ENST00000426946 1314 ntTSL 5 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 MTCO1P14-201ENST00000441695 1559 ntBASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 Y_RNA.89-201ENST00000363031 102 ntBASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 Y_RNA.535-201ENST00000384612 99 ntBASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 IGLV11-55-201ENST00000390286 381 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 U8.14-201ENST00000390843 143 ntBASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 AL138807.1-201ENST00000400354 459 ntBASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 NUS1P4-201ENST00000401550 585 ntBASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 AL450338.1-201ENST00000407987 512 ntBASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 AL772337.2-201ENST00000411992 981 ntTSL 3 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 LDHAP2-201ENST00000437325 985 ntBASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 AL513318.1-201ENST00000437925 991 ntBASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 RNF216-IT1-201ENST00000443837 337 ntTSL 5 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 AC034238.2-201ENST00000445660 567 ntTSL 4 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 RPL26P30-201ENST00000453533 435 ntBASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 AL109809.3-201ENST00000456875 246 ntBASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 RPS27P12-201ENST00000464146 258 ntBASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 OR5M14P-201ENST00000506803 618 ntBASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 AC079795.1-201ENST00000508847 358 ntTSL 3 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 AF131216.2-201ENST00000512316 564 ntBASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 SNRPCP8-201ENST00000514820 211 ntBASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 MTCO1P35-201ENST00000515270 228 ntBASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 RN7SKP197-201ENST00000517077 297 ntBASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 AC060765.1-202ENST00000518367 257 ntTSL 3 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 OXR1-212ENST00000521592 993 ntTSL 5 BASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 ULK4P2-202ENST00000564187 492 ntBASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 AC018558.5-201ENST00000565840 952 ntBASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 AC141257.3-201ENST00000572906 215 ntBASIC7.35□□□□□ -1.23
DEPDC4Q8N2C3 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms