Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC011225.1-201ENST00000457751 369 ntBASIC6.46□□□□□ -1.38
HERC6Q8IVU3 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.46□□□□□ -1.38
HERC6Q8IVU3 RPS23P6-201ENST00000466136 431 ntBASIC6.46□□□□□ -1.38
HERC6Q8IVU3 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.46□□□□□ -1.38
HERC6Q8IVU3 UBA52P7-201ENST00000486088 380 ntBASIC6.46□□□□□ -1.38
HERC6Q8IVU3 NDUFA5P12-201ENST00000503796 343 ntBASIC6.46□□□□□ -1.38
HERC6Q8IVU3 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
HERC6Q8IVU3 AC093763.2-201ENST00000505334 1223 ntBASIC6.46□□□□□ -1.38
HERC6Q8IVU3 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
HERC6Q8IVU3 IGBP1P1-201ENST00000554337 1009 ntBASIC6.46□□□□□ -1.38
HERC6Q8IVU3 AL049872.1-201ENST00000556323 322 ntBASIC6.46□□□□□ -1.38
HERC6Q8IVU3 AL390726.5-202ENST00000564800 256 ntBASIC6.46□□□□□ -1.38
HERC6Q8IVU3 AC007159.1-201ENST00000566529 4706 ntBASIC6.46□□□□□ -1.38
HERC6Q8IVU3 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.46□□□□□ -1.38
HERC6Q8IVU3 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC6.46□□□□□ -1.38
HERC6Q8IVU3 AC073111.2-201ENST00000605657 1075 ntBASIC6.46□□□□□ -1.38
HERC6Q8IVU3 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.46□□□□□ -1.38
HERC6Q8IVU3 AL445649.1-201ENST00000615941 691 ntBASIC6.46□□□□□ -1.38
HERC6Q8IVU3 AC020923.1-201ENST00000624021 917 ntBASIC6.46□□□□□ -1.38
HERC6Q8IVU3 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
HERC6Q8IVU3 CASC19-222ENST00000641321 1173 ntBASIC6.46□□□□□ -1.38
HERC6Q8IVU3 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
HERC6Q8IVU3 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
HERC6Q8IVU3 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
HERC6Q8IVU3 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
HERC6Q8IVU3 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.46□□□□□ -1.38
HERC6Q8IVU3 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
HERC6Q8IVU3 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.46□□□□□ -1.38
HERC6Q8IVU3 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 AC006511.3-201ENST00000624929 1783 ntBASIC6.45□□□□□ -1.38
HERC6Q8IVU3 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 MIR1286-201ENST00000408112 78 ntBASIC6.45□□□□□ -1.38
HERC6Q8IVU3 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 MRPL53P1-201ENST00000414323 319 ntBASIC6.45□□□□□ -1.38
HERC6Q8IVU3 CYP4F30P-202ENST00000420048 405 ntBASIC6.45□□□□□ -1.38
HERC6Q8IVU3 NME1P1-201ENST00000420914 382 ntBASIC6.45□□□□□ -1.38
HERC6Q8IVU3 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 TNPO1P1-201ENST00000423641 1138 ntBASIC6.45□□□□□ -1.38
HERC6Q8IVU3 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 NPM1P26-201ENST00000426339 738 ntBASIC6.45□□□□□ -1.38
HERC6Q8IVU3 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 CYCSP51-201ENST00000443545 318 ntBASIC6.45□□□□□ -1.38
HERC6Q8IVU3 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 RN7SL72P-201ENST00000460697 269 ntBASIC6.45□□□□□ -1.38
HERC6Q8IVU3 AC022336.1-201ENST00000475510 337 ntBASIC6.45□□□□□ -1.38
HERC6Q8IVU3 RN7SL826P-201ENST00000479724 288 ntBASIC6.45□□□□□ -1.38
HERC6Q8IVU3 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 AC008629.2-201ENST00000503783 483 ntBASIC6.45□□□□□ -1.38
HERC6Q8IVU3 RNA5SP92-201ENST00000516437 110 ntBASIC6.45□□□□□ -1.38
HERC6Q8IVU3 RNA5SP400-201ENST00000517155 111 ntBASIC6.45□□□□□ -1.38
HERC6Q8IVU3 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 RNU4ATAC-201ENST00000580972 127 ntBASIC6.45□□□□□ -1.38
HERC6Q8IVU3 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 AL137246.2-201ENST00000613439 662 ntBASIC6.45□□□□□ -1.38
HERC6Q8IVU3 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 AL356094.1-201ENST00000624663 1212 ntBASIC6.45□□□□□ -1.38
HERC6Q8IVU3 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 AC079753.1-201ENST00000623243 3868 ntBASIC6.45□□□□□ -1.38
HERC6Q8IVU3 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HERC6Q8IVU3 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.44□□□□□ -1.38
HERC6Q8IVU3 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.44□□□□□ -1.38
HERC6Q8IVU3 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HERC6Q8IVU3 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.44□□□□□ -1.38
HERC6Q8IVU3 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.44□□□□□ -1.38
HERC6Q8IVU3 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
HERC6Q8IVU3 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.44□□□□□ -1.38
HERC6Q8IVU3 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.44□□□□□ -1.38
HERC6Q8IVU3 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HERC6Q8IVU3 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
HERC6Q8IVU3 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms