Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC71Q8IV32 NFYAP1-201ENST00000431953 972 ntBASIC5.43□□□□□ -1.54
CCDC71Q8IV32 AC138761.5-201ENST00000433967 325 ntBASIC5.43□□□□□ -1.54
CCDC71Q8IV32 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC71Q8IV32 HMGN1P36-201ENST00000446623 298 ntBASIC5.43□□□□□ -1.54
CCDC71Q8IV32 AC110749.1-201ENST00000462007 357 ntBASIC5.43□□□□□ -1.54
CCDC71Q8IV32 AC090602.1-201ENST00000469695 252 ntBASIC5.43□□□□□ -1.54
CCDC71Q8IV32 RN7SL717P-201ENST00000478343 297 ntBASIC5.43□□□□□ -1.54
CCDC71Q8IV32 HMGB3P14-201ENST00000494195 599 ntBASIC5.43□□□□□ -1.54
CCDC71Q8IV32 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC71Q8IV32 WBP1LP3-201ENST00000523033 208 ntBASIC5.43□□□□□ -1.54
CCDC71Q8IV32 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CCDC71Q8IV32 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC71Q8IV32 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC71Q8IV32 AC020978.7-201ENST00000575953 1187 ntBASIC5.43□□□□□ -1.54
CCDC71Q8IV32 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC71Q8IV32 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC71Q8IV32 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.43□□□□□ -1.54
CCDC71Q8IV32 AL645933.2-201ENST00000606743 1207 ntBASIC5.43□□□□□ -1.54
CCDC71Q8IV32 MIR6809-201ENST00000612189 116 ntBASIC5.43□□□□□ -1.54
CCDC71Q8IV32 MIR6793-201ENST00000612376 63 ntBASIC5.43□□□□□ -1.54
CCDC71Q8IV32 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC71Q8IV32 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC71Q8IV32 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC71Q8IV32 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC71Q8IV32 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CCDC71Q8IV32 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CCDC71Q8IV32 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CCDC71Q8IV32 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC71Q8IV32 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC71Q8IV32 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC71Q8IV32 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC71Q8IV32 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC71Q8IV32 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC71Q8IV32 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC71Q8IV32 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC71Q8IV32 NEPNP-201ENST00000404786 1371 ntBASIC5.42□□□□□ -1.54
CCDC71Q8IV32 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.42□□□□□ -1.54
CCDC71Q8IV32 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC71Q8IV32 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC71Q8IV32 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CCDC71Q8IV32 RARSP1-201ENST00000542842 1418 ntBASIC5.42□□□□□ -1.54
CCDC71Q8IV32 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC71Q8IV32 AC012078.1-201ENST00000405035 1646 ntBASIC5.42□□□□□ -1.54
CCDC71Q8IV32 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC71Q8IV32 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC71Q8IV32 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
CCDC71Q8IV32 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC71Q8IV32 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC71Q8IV32 RN7SKP185-201ENST00000362813 326 ntBASIC5.42□□□□□ -1.54
CCDC71Q8IV32 RN7SKP292-201ENST00000365522 317 ntBASIC5.42□□□□□ -1.54
CCDC71Q8IV32 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC71Q8IV32 AC245060.4-201ENST00000413293 1121 ntBASIC5.42□□□□□ -1.54
CCDC71Q8IV32 AL096829.1-201ENST00000413677 457 ntBASIC5.42□□□□□ -1.54
CCDC71Q8IV32 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.42□□□□□ -1.54
CCDC71Q8IV32 AL035660.1-201ENST00000422041 222 ntBASIC5.42□□□□□ -1.54
CCDC71Q8IV32 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC71Q8IV32 RPS27AP6-201ENST00000427962 448 ntBASIC5.42□□□□□ -1.54
CCDC71Q8IV32 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC71Q8IV32 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC71Q8IV32 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC71Q8IV32 AL603882.1-201ENST00000463059 681 ntBASIC5.42□□□□□ -1.54
CCDC71Q8IV32 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.42□□□□□ -1.54
CCDC71Q8IV32 RPL7L1P4-201ENST00000513004 707 ntBASIC5.42□□□□□ -1.54
CCDC71Q8IV32 SETP21-201ENST00000514799 892 ntBASIC5.42□□□□□ -1.54
CCDC71Q8IV32 SNORA70.11-201ENST00000515987 138 ntBASIC5.42□□□□□ -1.54
CCDC71Q8IV32 SNORA70.13-201ENST00000516116 138 ntBASIC5.42□□□□□ -1.54
CCDC71Q8IV32 SCARNA18.1-201ENST00000516330 83 ntBASIC5.42□□□□□ -1.54
CCDC71Q8IV32 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC71Q8IV32 AC020937.1-201ENST00000519677 1013 ntBASIC5.42□□□□□ -1.54
CCDC71Q8IV32 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC71Q8IV32 AC079600.1-201ENST00000550326 297 ntBASIC5.42□□□□□ -1.54
CCDC71Q8IV32 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC71Q8IV32 SNORD95-201ENST00000579879 68 ntBASIC5.42□□□□□ -1.54
CCDC71Q8IV32 AC005244.1-201ENST00000582566 339 ntBASIC5.42□□□□□ -1.54
CCDC71Q8IV32 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC71Q8IV32 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC71Q8IV32 AC002069.2-201ENST00000603580 883 ntBASIC5.42□□□□□ -1.54
CCDC71Q8IV32 AL133481.2-203ENST00000607558 139 ntBASIC5.42□□□□□ -1.54
CCDC71Q8IV32 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC71Q8IV32 RN7SL787P-201ENST00000613000 284 ntBASIC5.42□□□□□ -1.54
CCDC71Q8IV32 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.42□□□□□ -1.54
CCDC71Q8IV32 AC005618.4-201ENST00000625053 554 ntBASIC5.42□□□□□ -1.54
CCDC71Q8IV32 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC71Q8IV32 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC71Q8IV32 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
CCDC71Q8IV32 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC71Q8IV32 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC71Q8IV32 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC71Q8IV32 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC71Q8IV32 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC71Q8IV32 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC71Q8IV32 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC71Q8IV32 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC71Q8IV32 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC71Q8IV32 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC71Q8IV32 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC71Q8IV32 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC71Q8IV32 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC71Q8IV32 PARP4P2-201ENST00000446672 3326 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms