Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.36□□□□□ -1.55
SHFQ7M4L6 TXNP4-201ENST00000575018 310 ntBASIC5.36□□□□□ -1.55
SHFQ7M4L6 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC5.36□□□□□ -1.55
SHFQ7M4L6 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.36□□□□□ -1.55
SHFQ7M4L6 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.36□□□□□ -1.55
SHFQ7M4L6 AC119403.2-201ENST00000590960 598 ntBASIC5.36□□□□□ -1.55
SHFQ7M4L6 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC5.36□□□□□ -1.55
SHFQ7M4L6 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.36□□□□□ -1.55
SHFQ7M4L6 AC015922.4-201ENST00000612568 690 ntBASIC5.36□□□□□ -1.55
SHFQ7M4L6 AC104763.3-201ENST00000613765 618 ntBASIC5.36□□□□□ -1.55
SHFQ7M4L6 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.36□□□□□ -1.55
SHFQ7M4L6 AC211486.4-201ENST00000621495 113 ntBASIC5.36□□□□□ -1.55
SHFQ7M4L6 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.36□□□□□ -1.55
SHFQ7M4L6 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.36□□□□□ -1.55
SHFQ7M4L6 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.36□□□□□ -1.55
SHFQ7M4L6 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SHFQ7M4L6 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SHFQ7M4L6 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.36□□□□□ -1.55
SHFQ7M4L6 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.36□□□□□ -1.55
SHFQ7M4L6 AC015689.2-201ENST00000528172 1738 ntBASIC5.36□□□□□ -1.55
SHFQ7M4L6 AL078595.2-201ENST00000605309 1780 ntBASIC5.36□□□□□ -1.55
SHFQ7M4L6 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SHFQ7M4L6 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.36□□□□□ -1.55
SHFQ7M4L6 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SHFQ7M4L6 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
SHFQ7M4L6 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
SHFQ7M4L6 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
SHFQ7M4L6 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SHFQ7M4L6 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHFQ7M4L6 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHFQ7M4L6 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHFQ7M4L6 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHFQ7M4L6 MAPK10-338ENST00000641647 3362 ntBASIC5.35□□□□□ -1.55
SHFQ7M4L6 AC130304.1-201ENST00000622942 2385 ntBASIC5.35□□□□□ -1.55
SHFQ7M4L6 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.35□□□□□ -1.55
SHFQ7M4L6 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.35□□□□□ -1.55
SHFQ7M4L6 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SHFQ7M4L6 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SHFQ7M4L6 AL132656.3-201ENST00000606384 1595 ntBASIC5.35□□□□□ -1.55
SHFQ7M4L6 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHFQ7M4L6 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHFQ7M4L6 OR4K17-201ENST00000315543 1032 ntBASIC5.35□□□□□ -1.55
SHFQ7M4L6 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.35□□□□□ -1.55
SHFQ7M4L6 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.35□□□□□ -1.55
SHFQ7M4L6 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SHFQ7M4L6 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SHFQ7M4L6 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SHFQ7M4L6 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.35□□□□□ -1.55
SHFQ7M4L6 REREP1Y-201ENST00000422655 198 ntBASIC5.35□□□□□ -1.55
SHFQ7M4L6 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.35□□□□□ -1.55
SHFQ7M4L6 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.35□□□□□ -1.55
SHFQ7M4L6 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.35□□□□□ -1.55
SHFQ7M4L6 REREP2Y-201ENST00000439103 200 ntBASIC5.35□□□□□ -1.55
SHFQ7M4L6 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SHFQ7M4L6 RPS18P1-201ENST00000447840 458 ntBASIC5.35□□□□□ -1.55
SHFQ7M4L6 RSU1P1-201ENST00000453416 441 ntBASIC5.35□□□□□ -1.55
SHFQ7M4L6 MTND2P6-201ENST00000455337 1030 ntBASIC5.35□□□□□ -1.55
SHFQ7M4L6 RBMY2HP-201ENST00000457961 720 ntBASIC5.35□□□□□ -1.55
SHFQ7M4L6 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.35□□□□□ -1.55
SHFQ7M4L6 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC5.35□□□□□ -1.55
SHFQ7M4L6 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.35□□□□□ -1.55
SHFQ7M4L6 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.35□□□□□ -1.55
SHFQ7M4L6 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.35□□□□□ -1.55
SHFQ7M4L6 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SHFQ7M4L6 MTCO1P31-201ENST00000506355 492 ntBASIC5.35□□□□□ -1.55
SHFQ7M4L6 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.35□□□□□ -1.55
SHFQ7M4L6 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.35□□□□□ -1.55
SHFQ7M4L6 OR5D2P-201ENST00000524390 911 ntBASIC5.35□□□□□ -1.55
SHFQ7M4L6 GTF2IP11-201ENST00000526931 420 ntBASIC5.35□□□□□ -1.55
SHFQ7M4L6 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.35□□□□□ -1.55
SHFQ7M4L6 AC068339.2-201ENST00000534395 618 ntBASIC5.35□□□□□ -1.55
SHFQ7M4L6 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
SHFQ7M4L6 AC090424.1-201ENST00000535243 736 ntBASIC5.35□□□□□ -1.55
SHFQ7M4L6 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SHFQ7M4L6 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.35□□□□□ -1.55
SHFQ7M4L6 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SHFQ7M4L6 AC006116.7-201ENST00000590141 756 ntBASIC5.35□□□□□ -1.55
SHFQ7M4L6 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.35□□□□□ -1.55
SHFQ7M4L6 AC133794.1-201ENST00000602731 914 ntBASIC5.35□□□□□ -1.55
SHFQ7M4L6 AC026979.4-201ENST00000606555 645 ntBASIC5.35□□□□□ -1.55
SHFQ7M4L6 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.35□□□□□ -1.55
SHFQ7M4L6 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.35□□□□□ -1.55
SHFQ7M4L6 AC095038.2-201ENST00000621464 1070 ntBASIC5.35□□□□□ -1.55
SHFQ7M4L6 AC009269.6-201ENST00000621778 588 ntBASIC5.35□□□□□ -1.55
SHFQ7M4L6 AC007204.1-201ENST00000621794 555 ntBASIC5.35□□□□□ -1.55
SHFQ7M4L6 AL122023.1-201ENST00000622847 530 ntBASIC5.35□□□□□ -1.55
SHFQ7M4L6 AL138955.1-201ENST00000622881 1040 ntBASIC5.35□□□□□ -1.55
SHFQ7M4L6 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SHFQ7M4L6 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.35□□□□□ -1.55
SHFQ7M4L6 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SHFQ7M4L6 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.35□□□□□ -1.55
SHFQ7M4L6 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHFQ7M4L6 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SHFQ7M4L6 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHFQ7M4L6 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.34□□□□□ -1.55
SHFQ7M4L6 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHFQ7M4L6 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHFQ7M4L6 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHFQ7M4L6 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHFQ7M4L6 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms