Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.56□□□□□ -1.68
KCNIP4Q6PIL6 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 AC130304.1-201ENST00000622942 2385 ntBASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 AC019178.1-201ENST00000392337 440 ntBASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 AL139100.1-201ENST00000408001 498 ntBASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 MEG8-201ENST00000414488 800 ntTSL 3 BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 RNGTTP1-201ENST00000420965 728 ntBASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 AL589794.1-201ENST00000424971 390 ntBASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 CYCSP11-201ENST00000436426 315 ntBASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 NPM1P23-201ENST00000440193 849 ntBASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 Z99127.2-201ENST00000441426 334 ntBASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 UBBP5-201ENST00000446970 266 ntBASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 VN1R48P-201ENST00000448149 1036 ntBASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 RPS23P9-201ENST00000448848 438 ntBASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 RPL10P17-201ENST00000453852 316 ntBASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 AC007386.1-201ENST00000455212 582 ntBASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 RBMY2EP-202ENST00000456360 940 ntBASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 UCK2-205ENST00000469256 753 ntTSL 3 BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 RN7SL188P-201ENST00000469842 285 ntBASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 RN7SL809P-201ENST00000482040 297 ntBASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 AC010442.1-201ENST00000515583 816 ntBASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 IGLVVII-41-1-201ENST00000518405 151 ntBASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 AC104997.1-201ENST00000519761 717 ntBASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 HMGB1P42-201ENST00000532126 553 ntBASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 OTX2-203ENST00000554559 715 ntTSL 5 BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 AC127024.5-201ENST00000580085 462 ntBASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 RPL23AP61-201ENST00000623642 466 ntBASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 AP002967.1-201ENST00000624203 539 ntBASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 AC021766.1-201ENST00000624404 741 ntBASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
KCNIP4Q6PIL6 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
KCNIP4Q6PIL6 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
KCNIP4Q6PIL6 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.54□□□□□ -1.68
KCNIP4Q6PIL6 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
KCNIP4Q6PIL6 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
KCNIP4Q6PIL6 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
KCNIP4Q6PIL6 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
KCNIP4Q6PIL6 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
KCNIP4Q6PIL6 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
KCNIP4Q6PIL6 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
KCNIP4Q6PIL6 RN7SKP74-201ENST00000362849 309 ntBASIC4.54□□□□□ -1.68
KCNIP4Q6PIL6 RN7SKP130-201ENST00000364924 301 ntBASIC4.54□□□□□ -1.68
KCNIP4Q6PIL6 RNA5SP152-201ENST00000365184 110 ntBASIC4.54□□□□□ -1.68
KCNIP4Q6PIL6 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC4.54□□□□□ -1.68
KCNIP4Q6PIL6 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC4.54□□□□□ -1.68
KCNIP4Q6PIL6 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.54□□□□□ -1.68
KCNIP4Q6PIL6 SNORA68.2-201ENST00000391263 128 ntBASIC4.54□□□□□ -1.68
KCNIP4Q6PIL6 EEF1GP6-201ENST00000402309 905 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms