Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 GIN1-201ENST00000399004 3229 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
VARS2Q5ST30 IKZF3-217ENST00000623724 9787 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
VARS2Q5ST30 SCYL2-211ENST00000635101 3948 ntTSL 5 BASIC8.69□□□□□ -1.02
VARS2Q5ST30 AC008895.1-201ENST00000624074 2622 ntBASIC8.69□□□□□ -1.02
VARS2Q5ST30 BRPF3-212ENST00000534694 4628 ntTSL 5 BASIC8.69□□□□□ -1.02
VARS2Q5ST30 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
VARS2Q5ST30 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
VARS2Q5ST30 AC093768.1-201ENST00000505987 2173 ntBASIC8.69□□□□□ -1.02
VARS2Q5ST30 LIMS1-203ENST00000393310 4392 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
VARS2Q5ST30 DAZ2-207ENST00000382449 3791 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
VARS2Q5ST30 PAAF1-202ENST00000376384 1500 ntTSL 5 BASIC8.69□□□□□ -1.02
VARS2Q5ST30 FRMPD2-201ENST00000305531 4665 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
VARS2Q5ST30 FANCL-203ENST00000403295 1576 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
VARS2Q5ST30 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
VARS2Q5ST30 CLDN16-201ENST00000264734 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
VARS2Q5ST30 HEATR6-203ENST00000585976 3288 ntTSL 5 BASIC8.69□□□□□ -1.02
VARS2Q5ST30 HEATR6-212ENST00000613428 3287 ntTSL 5 BASIC8.69□□□□□ -1.02
VARS2Q5ST30 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
VARS2Q5ST30 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC8.68□□□□□ -1.02
VARS2Q5ST30 AL022334.1-201ENST00000417397 1726 ntBASIC8.68□□□□□ -1.02
VARS2Q5ST30 NF1P1-201ENST00000604105 2645 ntBASIC8.68□□□□□ -1.02
VARS2Q5ST30 MAPK8-201ENST00000360332 5438 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
VARS2Q5ST30 MTND5P10-201ENST00000603719 1809 ntBASIC8.68□□□□□ -1.02
VARS2Q5ST30 TBX5-201ENST00000310346 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
VARS2Q5ST30 ERG-210ENST00000442448 5034 ntTSL 5 BASIC8.68□□□□□ -1.02
VARS2Q5ST30 LINC02177-201ENST00000564305 5298 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
VARS2Q5ST30 AC093117.1-201ENST00000413541 2171 ntTSL 2 BASIC8.68□□□□□ -1.02
VARS2Q5ST30 TTLL9-206ENST00000535842 3261 ntAPPRIS P2 TSL 5 BASIC8.68□□□□□ -1.02
VARS2Q5ST30 EYA4-203ENST00000367895 5699 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
VARS2Q5ST30 MYO1A-201ENST00000300119 3621 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
VARS2Q5ST30 MALAT1-202ENST00000534336 8708 ntBASIC8.68□□□□□ -1.02
VARS2Q5ST30 OR9K1P-201ENST00000326513 941 ntBASIC8.68□□□□□ -1.02
VARS2Q5ST30 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC8.68□□□□□ -1.02
VARS2Q5ST30 RNU6-533P-201ENST00000384144 107 ntBASIC8.68□□□□□ -1.02
VARS2Q5ST30 Y_RNA.515-201ENST00000384535 112 ntBASIC8.68□□□□□ -1.02
VARS2Q5ST30 OR4F1P-201ENST00000405102 938 ntBASIC8.68□□□□□ -1.02
VARS2Q5ST30 DNAJA1P4-201ENST00000406473 1166 ntBASIC8.68□□□□□ -1.02
VARS2Q5ST30 Y_RNA.608-201ENST00000410647 95 ntBASIC8.68□□□□□ -1.02
VARS2Q5ST30 RN7SKP121-201ENST00000410842 305 ntBASIC8.68□□□□□ -1.02
VARS2Q5ST30 RNU6-1304P-201ENST00000411374 106 ntBASIC8.68□□□□□ -1.02
VARS2Q5ST30 AKR1B15-201ENST00000423958 1035 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
VARS2Q5ST30 OR4F2P-201ENST00000424047 938 ntBASIC8.68□□□□□ -1.02
VARS2Q5ST30 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC8.68□□□□□ -1.02
VARS2Q5ST30 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC8.68□□□□□ -1.02
VARS2Q5ST30 AC009228.1-203ENST00000430105 432 ntTSL 3 BASIC8.68□□□□□ -1.02
VARS2Q5ST30 SEPT7P5-201ENST00000434048 306 ntBASIC8.68□□□□□ -1.02
VARS2Q5ST30 MTND5P15-201ENST00000434246 349 ntBASIC8.68□□□□□ -1.02
VARS2Q5ST30 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC8.68□□□□□ -1.02
VARS2Q5ST30 AL606534.2-201ENST00000436756 624 ntTSL 5 BASIC8.68□□□□□ -1.02
VARS2Q5ST30 MIATNB-204ENST00000437071 1006 ntTSL 3 BASIC8.68□□□□□ -1.02
VARS2Q5ST30 AC019185.3-201ENST00000438805 323 ntBASIC8.68□□□□□ -1.02
VARS2Q5ST30 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
VARS2Q5ST30 HSFY6P-201ENST00000445573 403 ntBASIC8.68□□□□□ -1.02
VARS2Q5ST30 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC8.68□□□□□ -1.02
VARS2Q5ST30 PRMT8-203ENST00000452611 1204 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
VARS2Q5ST30 AC008571.1-201ENST00000467232 300 ntBASIC8.68□□□□□ -1.02
VARS2Q5ST30 AC128713.1-201ENST00000471495 306 ntBASIC8.68□□□□□ -1.02
VARS2Q5ST30 RPL38P3-201ENST00000484463 213 ntBASIC8.68□□□□□ -1.02
VARS2Q5ST30 AC015911.1-201ENST00000495111 156 ntBASIC8.68□□□□□ -1.02
VARS2Q5ST30 PCBP2P3-201ENST00000509726 843 ntBASIC8.68□□□□□ -1.02
VARS2Q5ST30 AC098591.2-201ENST00000510152 315 ntBASIC8.68□□□□□ -1.02
VARS2Q5ST30 SNORA25.10-201ENST00000515926 124 ntBASIC8.68□□□□□ -1.02
VARS2Q5ST30 Y_RNA.680-201ENST00000516441 93 ntBASIC8.68□□□□□ -1.02
VARS2Q5ST30 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC8.68□□□□□ -1.02
VARS2Q5ST30 IGHVII-78-1-201ENST00000521105 269 ntBASIC8.68□□□□□ -1.02
VARS2Q5ST30 KCTD9P6-201ENST00000522306 950 ntBASIC8.68□□□□□ -1.02
VARS2Q5ST30 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC8.68□□□□□ -1.02
VARS2Q5ST30 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC8.68□□□□□ -1.02
VARS2Q5ST30 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC8.68□□□□□ -1.02
VARS2Q5ST30 RPL21P7-201ENST00000557463 483 ntBASIC8.68□□□□□ -1.02
VARS2Q5ST30 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC8.68□□□□□ -1.02
VARS2Q5ST30 ZNF322P1-201ENST00000568013 1209 ntBASIC8.68□□□□□ -1.02
VARS2Q5ST30 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC8.68□□□□□ -1.02
VARS2Q5ST30 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC8.68□□□□□ -1.02
VARS2Q5ST30 AC005021.1-201ENST00000608730 355 ntBASIC8.68□□□□□ -1.02
VARS2Q5ST30 PFN1P2-202ENST00000621347 397 ntBASIC8.68□□□□□ -1.02
VARS2Q5ST30 PROX2-202ENST00000556489 3878 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
VARS2Q5ST30 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC8.68□□□□□ -1.02
VARS2Q5ST30 DNAJC5B-201ENST00000276570 1382 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
VARS2Q5ST30 AC092725.2-201ENST00000567658 1389 ntBASIC8.68□□□□□ -1.02
VARS2Q5ST30 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
VARS2Q5ST30 ZNF174-203ENST00000571936 1586 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
VARS2Q5ST30 AF287957.1-201ENST00000607368 1595 ntBASIC8.68□□□□□ -1.02
VARS2Q5ST30 AASS-203ENST00000417368 3163 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
VARS2Q5ST30 R3HCC1L-203ENST00000370584 3372 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
VARS2Q5ST30 NOP14-AS1-207ENST00000515194 3860 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
VARS2Q5ST30 CASR-201ENST00000490131 4015 ntTSL 5 BASIC8.68□□□□□ -1.02
VARS2Q5ST30 ZMYND8-201ENST00000262975 4139 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
VARS2Q5ST30 ARL6IP5-201ENST00000273258 2101 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
VARS2Q5ST30 AC127070.5-201ENST00000623177 2104 ntBASIC8.68□□□□□ -1.02
VARS2Q5ST30 NR2F1-AS1-208ENST00000606233 2264 ntTSL 2 BASIC8.68□□□□□ -1.02
VARS2Q5ST30 MEF2C-221ENST00000514015 2772 ntTSL 5 BASIC8.67□□□□□ -1.02
VARS2Q5ST30 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
VARS2Q5ST30 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
VARS2Q5ST30 LINC00467-201ENST00000423222 3508 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
VARS2Q5ST30 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC8.67□□□□□ -1.02
VARS2Q5ST30 HMGCR-202ENST00000343975 3681 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
VARS2Q5ST30 GINS1-201ENST00000262460 3249 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
VARS2Q5ST30 SPATA19-201ENST00000299140 861 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
VARS2Q5ST30 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC8.67□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms