Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HMGCS1Q01581 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.39□□□□□ -1.55
HMGCS1Q01581 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMGCS1Q01581 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMGCS1Q01581 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMGCS1Q01581 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
HMGCS1Q01581 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
HMGCS1Q01581 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HMGCS1Q01581 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HMGCS1Q01581 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMGCS1Q01581 SNORA64.1-201ENST00000362600 132 ntBASIC5.39□□□□□ -1.55
HMGCS1Q01581 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.39□□□□□ -1.55
HMGCS1Q01581 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
HMGCS1Q01581 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.39□□□□□ -1.55
HMGCS1Q01581 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
HMGCS1Q01581 HMGN1P20-201ENST00000411849 300 ntBASIC5.39□□□□□ -1.55
HMGCS1Q01581 RPSAP35-201ENST00000413753 818 ntBASIC5.39□□□□□ -1.55
HMGCS1Q01581 RNF10P1-201ENST00000418589 369 ntBASIC5.39□□□□□ -1.55
HMGCS1Q01581 AL035660.1-201ENST00000422041 222 ntBASIC5.39□□□□□ -1.55
HMGCS1Q01581 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.39□□□□□ -1.55
HMGCS1Q01581 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.39□□□□□ -1.55
HMGCS1Q01581 RPL5P2-201ENST00000429598 854 ntBASIC5.39□□□□□ -1.55
HMGCS1Q01581 HMGB3P24-201ENST00000433260 622 ntBASIC5.39□□□□□ -1.55
HMGCS1Q01581 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.39□□□□□ -1.55
HMGCS1Q01581 AL359265.1-201ENST00000440296 795 ntBASIC5.39□□□□□ -1.55
HMGCS1Q01581 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.39□□□□□ -1.55
HMGCS1Q01581 AC017007.3-201ENST00000479865 435 ntBASIC5.39□□□□□ -1.55
HMGCS1Q01581 AC022215.1-201ENST00000481770 362 ntBASIC5.39□□□□□ -1.55
HMGCS1Q01581 ATP5LP5-201ENST00000483050 299 ntBASIC5.39□□□□□ -1.55
HMGCS1Q01581 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.39□□□□□ -1.55
HMGCS1Q01581 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
HMGCS1Q01581 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.39□□□□□ -1.55
HMGCS1Q01581 PMS2P3-207ENST00000529061 717 ntBASIC5.39□□□□□ -1.55
HMGCS1Q01581 AP000648.1-201ENST00000529682 397 ntBASIC5.39□□□□□ -1.55
HMGCS1Q01581 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.39□□□□□ -1.55
HMGCS1Q01581 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.39□□□□□ -1.55
HMGCS1Q01581 AC015802.2-201ENST00000589690 189 ntBASIC5.39□□□□□ -1.55
HMGCS1Q01581 AL031601.1-201ENST00000605702 394 ntBASIC5.39□□□□□ -1.55
HMGCS1Q01581 RNA5SP439-201ENST00000617595 124 ntBASIC5.39□□□□□ -1.55
HMGCS1Q01581 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.39□□□□□ -1.55
HMGCS1Q01581 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMGCS1Q01581 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMGCS1Q01581 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.39□□□□□ -1.55
HMGCS1Q01581 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
HMGCS1Q01581 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMGCS1Q01581 ADAM24P-201ENST00000398655 2101 ntBASIC5.39□□□□□ -1.55
HMGCS1Q01581 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.39□□□□□ -1.55
HMGCS1Q01581 NEPNP-201ENST00000404786 1371 ntBASIC5.39□□□□□ -1.55
HMGCS1Q01581 NR1H5P-201ENST00000452683 1377 ntBASIC5.39□□□□□ -1.55
HMGCS1Q01581 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
HMGCS1Q01581 AL442128.2-201ENST00000620246 1824 ntBASIC5.39□□□□□ -1.55
HMGCS1Q01581 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMGCS1Q01581 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
HMGCS1Q01581 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HMGCS1Q01581 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.39□□□□□ -1.55
HMGCS1Q01581 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
HMGCS1Q01581 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.38□□□□□ -1.55
HMGCS1Q01581 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
HMGCS1Q01581 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMGCS1Q01581 AC006206.1-201ENST00000544842 3387 ntBASIC5.38□□□□□ -1.55
HMGCS1Q01581 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.38□□□□□ -1.55
HMGCS1Q01581 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
HMGCS1Q01581 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.38□□□□□ -1.55
HMGCS1Q01581 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HMGCS1Q01581 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMGCS1Q01581 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HMGCS1Q01581 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HMGCS1Q01581 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.38□□□□□ -1.55
HMGCS1Q01581 AC023490.2-201ENST00000359859 470 ntBASIC5.38□□□□□ -1.55
HMGCS1Q01581 GAPDHP34-201ENST00000432112 823 ntBASIC5.38□□□□□ -1.55
HMGCS1Q01581 AL512637.1-201ENST00000439523 1231 ntBASIC5.38□□□□□ -1.55
HMGCS1Q01581 UBE2V2P4-201ENST00000447495 259 ntBASIC5.38□□□□□ -1.55
HMGCS1Q01581 AL596266.1-201ENST00000448132 400 ntBASIC5.38□□□□□ -1.55
HMGCS1Q01581 RPS23P6-201ENST00000466136 431 ntBASIC5.38□□□□□ -1.55
HMGCS1Q01581 NENFP3-201ENST00000503735 313 ntBASIC5.38□□□□□ -1.55
HMGCS1Q01581 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HMGCS1Q01581 OR4A17P-201ENST00000526032 904 ntBASIC5.38□□□□□ -1.55
HMGCS1Q01581 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.38□□□□□ -1.55
HMGCS1Q01581 OR5AM1P-201ENST00000532136 1032 ntBASIC5.38□□□□□ -1.55
HMGCS1Q01581 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.38□□□□□ -1.55
HMGCS1Q01581 AC092121.1-201ENST00000569452 202 ntBASIC5.38□□□□□ -1.55
HMGCS1Q01581 MIR4311-201ENST00000580794 100 ntBASIC5.38□□□□□ -1.55
HMGCS1Q01581 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.38□□□□□ -1.55
HMGCS1Q01581 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.38□□□□□ -1.55
HMGCS1Q01581 AL353684.1-201ENST00000622677 1120 ntBASIC5.38□□□□□ -1.55
HMGCS1Q01581 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.38□□□□□ -1.55
HMGCS1Q01581 AP000550.3-201ENST00000637734 379 ntBASIC5.38□□□□□ -1.55
HMGCS1Q01581 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMGCS1Q01581 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
HMGCS1Q01581 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.38□□□□□ -1.55
HMGCS1Q01581 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
HMGCS1Q01581 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.38□□□□□ -1.55
HMGCS1Q01581 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HMGCS1Q01581 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HMGCS1Q01581 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
HMGCS1Q01581 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
HMGCS1Q01581 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
HMGCS1Q01581 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMGCS1Q01581 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
HMGCS1Q01581 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms