Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CX3CL1P78423 RNU6-609P-201ENST00000365459 107 ntBASIC4.88□□□□□ -1.63
CX3CL1P78423 RNU6-650P-201ENST00000365658 111 ntBASIC4.88□□□□□ -1.63
CX3CL1P78423 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
CX3CL1P78423 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC4.88□□□□□ -1.63
CX3CL1P78423 RNU6-31P-201ENST00000384388 108 ntBASIC4.88□□□□□ -1.63
CX3CL1P78423 DNAJA1P3-201ENST00000399417 1194 ntBASIC4.88□□□□□ -1.63
CX3CL1P78423 AL096800.1-201ENST00000405326 893 ntBASIC4.88□□□□□ -1.63
CX3CL1P78423 RNA5SP156-201ENST00000410250 110 ntBASIC4.88□□□□□ -1.63
CX3CL1P78423 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC4.88□□□□□ -1.63
CX3CL1P78423 AC009506.2-201ENST00000420635 840 ntBASIC4.88□□□□□ -1.63
CX3CL1P78423 AC092865.3-201ENST00000425390 1026 ntBASIC4.88□□□□□ -1.63
CX3CL1P78423 AC016027.5-201ENST00000427227 210 ntBASIC4.88□□□□□ -1.63
CX3CL1P78423 AC108479.1-201ENST00000431142 427 ntBASIC4.88□□□□□ -1.63
CX3CL1P78423 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.88□□□□□ -1.63
CX3CL1P78423 Z83838.1-202ENST00000456225 839 ntBASIC4.88□□□□□ -1.63
CX3CL1P78423 EIF2S2P5-201ENST00000457635 968 ntBASIC4.88□□□□□ -1.63
CX3CL1P78423 AC093719.1-201ENST00000480427 441 ntBASIC4.88□□□□□ -1.63
CX3CL1P78423 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC4.88□□□□□ -1.63
CX3CL1P78423 AL035690.1-201ENST00000490892 383 ntBASIC4.88□□□□□ -1.63
CX3CL1P78423 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.88□□□□□ -1.63
CX3CL1P78423 AC092349.1-201ENST00000504903 310 ntBASIC4.88□□□□□ -1.63
CX3CL1P78423 AC112484.3-201ENST00000505910 329 ntBASIC4.88□□□□□ -1.63
CX3CL1P78423 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC4.88□□□□□ -1.63
CX3CL1P78423 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC4.88□□□□□ -1.63
CX3CL1P78423 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.88□□□□□ -1.63
CX3CL1P78423 AC113192.3-201ENST00000529152 742 ntBASIC4.88□□□□□ -1.63
CX3CL1P78423 AC004923.2-201ENST00000529649 369 ntBASIC4.88□□□□□ -1.63
CX3CL1P78423 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CX3CL1P78423 OSBPL9P3-201ENST00000534523 595 ntBASIC4.88□□□□□ -1.63
CX3CL1P78423 SNORD39.2-201ENST00000579995 76 ntBASIC4.88□□□□□ -1.63
CX3CL1P78423 RNU4ATAC-201ENST00000580972 127 ntBASIC4.88□□□□□ -1.63
CX3CL1P78423 AP005136.2-201ENST00000583253 1049 ntBASIC4.88□□□□□ -1.63
CX3CL1P78423 AP001357.1-201ENST00000586304 1053 ntBASIC4.88□□□□□ -1.63
CX3CL1P78423 AC020916.2-201ENST00000591242 360 ntBASIC4.88□□□□□ -1.63
CX3CL1P78423 SMIM12P1-201ENST00000603004 274 ntBASIC4.88□□□□□ -1.63
CX3CL1P78423 AC141002.1-201ENST00000607025 279 ntBASIC4.88□□□□□ -1.63
CX3CL1P78423 AC120053.1-201ENST00000607706 736 ntBASIC4.88□□□□□ -1.63
CX3CL1P78423 uc_338.31-201ENST00000615595 186 ntBASIC4.88□□□□□ -1.63
CX3CL1P78423 MIR1264-201ENST00000616374 69 ntBASIC4.88□□□□□ -1.63
CX3CL1P78423 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.88□□□□□ -1.63
CX3CL1P78423 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CX3CL1P78423 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CX3CL1P78423 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CX3CL1P78423 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CX3CL1P78423 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
CX3CL1P78423 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CX3CL1P78423 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.88□□□□□ -1.63
CX3CL1P78423 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC4.88□□□□□ -1.63
CX3CL1P78423 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CX3CL1P78423 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CX3CL1P78423 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CX3CL1P78423 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CL1P78423 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CL1P78423 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CL1P78423 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CL1P78423 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CL1P78423 AC093671.1-201ENST00000624981 2929 ntBASIC4.87□□□□□ -1.63
CX3CL1P78423 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CL1P78423 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC4.87□□□□□ -1.63
CX3CL1P78423 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CL1P78423 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CL1P78423 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CX3CL1P78423 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CL1P78423 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CL1P78423 KARSP1-201ENST00000451871 1752 ntBASIC4.87□□□□□ -1.63
CX3CL1P78423 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CL1P78423 METTL5-202ENST00000308099 629 ntTSL 3 BASIC4.87□□□□□ -1.63
CX3CL1P78423 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC4.87□□□□□ -1.63
CX3CL1P78423 RNA5SP375-201ENST00000362975 119 ntBASIC4.87□□□□□ -1.63
CX3CL1P78423 RNU6-792P-201ENST00000363490 107 ntBASIC4.87□□□□□ -1.63
CX3CL1P78423 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CL1P78423 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CX3CL1P78423 YWHAZP6-201ENST00000399764 738 ntBASIC4.87□□□□□ -1.63
CX3CL1P78423 RN7SKP86-201ENST00000410454 332 ntBASIC4.87□□□□□ -1.63
CX3CL1P78423 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.87□□□□□ -1.63
CX3CL1P78423 RPS7P8-201ENST00000418311 581 ntBASIC4.87□□□□□ -1.63
CX3CL1P78423 MTND4LP13-201ENST00000425022 298 ntBASIC4.87□□□□□ -1.63
CX3CL1P78423 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.87□□□□□ -1.63
CX3CL1P78423 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC4.87□□□□□ -1.63
CX3CL1P78423 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC4.87□□□□□ -1.63
CX3CL1P78423 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.87□□□□□ -1.63
CX3CL1P78423 GAPDHP59-201ENST00000435908 267 ntBASIC4.87□□□□□ -1.63
CX3CL1P78423 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC4.87□□□□□ -1.63
CX3CL1P78423 AC010240.2-201ENST00000445363 1205 ntBASIC4.87□□□□□ -1.63
CX3CL1P78423 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.87□□□□□ -1.63
CX3CL1P78423 RAB28P2-201ENST00000454299 641 ntBASIC4.87□□□□□ -1.63
CX3CL1P78423 YRDCP3-201ENST00000456507 480 ntBASIC4.87□□□□□ -1.63
CX3CL1P78423 RN7SL254P-201ENST00000460609 284 ntBASIC4.87□□□□□ -1.63
CX3CL1P78423 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC4.87□□□□□ -1.63
CX3CL1P78423 HMGN1P17-201ENST00000513734 295 ntBASIC4.87□□□□□ -1.63
CX3CL1P78423 RNA5SP434-201ENST00000516647 121 ntBASIC4.87□□□□□ -1.63
CX3CL1P78423 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC4.87□□□□□ -1.63
CX3CL1P78423 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC4.87□□□□□ -1.63
CX3CL1P78423 AC136777.2-201ENST00000522979 358 ntBASIC4.87□□□□□ -1.63
CX3CL1P78423 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.87□□□□□ -1.63
CX3CL1P78423 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.87□□□□□ -1.63
CX3CL1P78423 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC4.87□□□□□ -1.63
CX3CL1P78423 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC4.87□□□□□ -1.63
CX3CL1P78423 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms