Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.04□□□□□ -1.76
CKS1BP61024 RPL5P16-201ENST00000471467 790 ntBASIC4.04□□□□□ -1.76
CKS1BP61024 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CKS1BP61024 RPL5P33-201ENST00000487833 905 ntBASIC4.04□□□□□ -1.76
CKS1BP61024 OR4D12P-201ENST00000509361 911 ntBASIC4.04□□□□□ -1.76
CKS1BP61024 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.04□□□□□ -1.76
CKS1BP61024 HMGB3P13-201ENST00000511263 607 ntBASIC4.04□□□□□ -1.76
CKS1BP61024 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC4.04□□□□□ -1.76
CKS1BP61024 RNA5SP228-201ENST00000516232 133 ntBASIC4.04□□□□□ -1.76
CKS1BP61024 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC4.04□□□□□ -1.76
CKS1BP61024 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CKS1BP61024 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC4.04□□□□□ -1.76
CKS1BP61024 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.04□□□□□ -1.76
CKS1BP61024 AC130366.1-201ENST00000526505 1192 ntBASIC4.04□□□□□ -1.76
CKS1BP61024 AC008055.1-201ENST00000547032 609 ntBASIC4.04□□□□□ -1.76
CKS1BP61024 ZNF322P1-201ENST00000568013 1209 ntBASIC4.04□□□□□ -1.76
CKS1BP61024 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.04□□□□□ -1.76
CKS1BP61024 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC4.04□□□□□ -1.76
CKS1BP61024 AC036176.3-201ENST00000602456 418 ntBASIC4.04□□□□□ -1.76
CKS1BP61024 AC008555.7-201ENST00000605008 583 ntBASIC4.04□□□□□ -1.76
CKS1BP61024 Z93930.3-201ENST00000607919 749 ntBASIC4.04□□□□□ -1.76
CKS1BP61024 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC4.04□□□□□ -1.76
CKS1BP61024 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC4.04□□□□□ -1.76
CKS1BP61024 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
CKS1BP61024 AC015908.5-201ENST00000623289 343 ntBASIC4.04□□□□□ -1.76
CKS1BP61024 AC068213.1-201ENST00000625124 226 ntBASIC4.04□□□□□ -1.76
CKS1BP61024 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.04□□□□□ -1.76
CKS1BP61024 CLUHP10-201ENST00000631979 980 ntBASIC4.04□□□□□ -1.76
CKS1BP61024 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CKS1BP61024 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.04□□□□□ -1.76
CKS1BP61024 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CKS1BP61024 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CKS1BP61024 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CKS1BP61024 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.04□□□□□ -1.76
CKS1BP61024 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CKS1BP61024 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC4.04□□□□□ -1.76
CKS1BP61024 AL158152.1-201ENST00000602652 1435 ntBASIC4.04□□□□□ -1.76
CKS1BP61024 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
CKS1BP61024 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.03□□□□□ -1.76
CKS1BP61024 OFD1P15Y-201ENST00000411536 1392 ntBASIC4.03□□□□□ -1.76
CKS1BP61024 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CKS1BP61024 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CKS1BP61024 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.03□□□□□ -1.76
CKS1BP61024 GNL2P1-201ENST00000451274 2190 ntBASIC4.03□□□□□ -1.76
CKS1BP61024 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CKS1BP61024 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CKS1BP61024 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC4.03□□□□□ -1.76
CKS1BP61024 CRP-204ENST00000368112 787 ntTSL 2 BASIC4.03□□□□□ -1.76
CKS1BP61024 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CKS1BP61024 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CKS1BP61024 RNU1-74P-201ENST00000384108 171 ntBASIC4.03□□□□□ -1.76
CKS1BP61024 RNU6-178P-201ENST00000384631 104 ntBASIC4.03□□□□□ -1.76
CKS1BP61024 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CKS1BP61024 RPL12P23-201ENST00000405880 490 ntBASIC4.03□□□□□ -1.76
CKS1BP61024 AL353133.1-201ENST00000407695 401 ntBASIC4.03□□□□□ -1.76
CKS1BP61024 SNORA77.2-201ENST00000408571 112 ntBASIC4.03□□□□□ -1.76
CKS1BP61024 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CKS1BP61024 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.03□□□□□ -1.76
CKS1BP61024 AL360013.1-201ENST00000419031 858 ntBASIC4.03□□□□□ -1.76
CKS1BP61024 AL590609.2-201ENST00000421430 368 ntBASIC4.03□□□□□ -1.76
CKS1BP61024 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC4.03□□□□□ -1.76
CKS1BP61024 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC4.03□□□□□ -1.76
CKS1BP61024 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.03□□□□□ -1.76
CKS1BP61024 CCNB1IP1P1-201ENST00000428976 839 ntBASIC4.03□□□□□ -1.76
CKS1BP61024 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CKS1BP61024 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC4.03□□□□□ -1.76
CKS1BP61024 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.03□□□□□ -1.76
CKS1BP61024 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.03□□□□□ -1.76
CKS1BP61024 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CKS1BP61024 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC4.03□□□□□ -1.76
CKS1BP61024 NPM1P9-201ENST00000453156 844 ntBASIC4.03□□□□□ -1.76
CKS1BP61024 TREML3P-201ENST00000457327 501 ntBASIC4.03□□□□□ -1.76
CKS1BP61024 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.03□□□□□ -1.76
CKS1BP61024 GM2AP2-201ENST00000491764 562 ntBASIC4.03□□□□□ -1.76
CKS1BP61024 AC009567.2-201ENST00000502989 349 ntBASIC4.03□□□□□ -1.76
CKS1BP61024 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC4.03□□□□□ -1.76
CKS1BP61024 AC112184.1-201ENST00000505179 312 ntBASIC4.03□□□□□ -1.76
CKS1BP61024 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC4.03□□□□□ -1.76
CKS1BP61024 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC4.03□□□□□ -1.76
CKS1BP61024 AC090958.1-201ENST00000511122 351 ntBASIC4.03□□□□□ -1.76
CKS1BP61024 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CKS1BP61024 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
CKS1BP61024 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.03□□□□□ -1.76
CKS1BP61024 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC4.03□□□□□ -1.76
CKS1BP61024 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC4.03□□□□□ -1.76
CKS1BP61024 AP001858.2-201ENST00000536213 601 ntBASIC4.03□□□□□ -1.76
CKS1BP61024 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC4.03□□□□□ -1.76
CKS1BP61024 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC4.03□□□□□ -1.76
CKS1BP61024 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC4.03□□□□□ -1.76
CKS1BP61024 AC011270.1-201ENST00000558606 583 ntBASIC4.03□□□□□ -1.76
CKS1BP61024 AL163952.1-202ENST00000569625 600 ntBASIC4.03□□□□□ -1.76
CKS1BP61024 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CKS1BP61024 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC4.03□□□□□ -1.76
CKS1BP61024 RNU4ATAC-201ENST00000580972 127 ntBASIC4.03□□□□□ -1.76
CKS1BP61024 AC134669.1-201ENST00000581275 672 ntBASIC4.03□□□□□ -1.76
CKS1BP61024 MIR4732-201ENST00000581873 76 ntBASIC4.03□□□□□ -1.76
CKS1BP61024 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC4.03□□□□□ -1.76
CKS1BP61024 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC4.03□□□□□ -1.76
CKS1BP61024 AL034374.2-201ENST00000605281 548 ntBASIC4.03□□□□□ -1.76
CKS1BP61024 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms