Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 RPA2P2-201ENST00000419698 796 ntBASIC5.52□□□□□ -1.53
CLDN6P56747 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.52□□□□□ -1.53
CLDN6P56747 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.52□□□□□ -1.53
CLDN6P56747 AL022319.1-201ENST00000458183 1167 ntBASIC5.52□□□□□ -1.53
CLDN6P56747 RPL7AP6-201ENST00000477943 801 ntBASIC5.52□□□□□ -1.53
CLDN6P56747 AC090638.1-201ENST00000498296 909 ntBASIC5.52□□□□□ -1.53
CLDN6P56747 LDHBP3-201ENST00000514909 822 ntBASIC5.52□□□□□ -1.53
CLDN6P56747 AC021146.10-201ENST00000515628 706 ntBASIC5.52□□□□□ -1.53
CLDN6P56747 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.52□□□□□ -1.53
CLDN6P56747 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.52□□□□□ -1.53
CLDN6P56747 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.52□□□□□ -1.53
CLDN6P56747 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.52□□□□□ -1.53
CLDN6P56747 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.52□□□□□ -1.53
CLDN6P56747 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CLDN6P56747 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.52□□□□□ -1.53
CLDN6P56747 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.52□□□□□ -1.53
CLDN6P56747 AC063977.5-201ENST00000601044 974 ntBASIC5.52□□□□□ -1.53
CLDN6P56747 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.52□□□□□ -1.53
CLDN6P56747 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.52□□□□□ -1.53
CLDN6P56747 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.52□□□□□ -1.53
CLDN6P56747 AP002505.2-201ENST00000623585 696 ntBASIC5.52□□□□□ -1.53
CLDN6P56747 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.52□□□□□ -1.53
CLDN6P56747 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CLDN6P56747 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.52□□□□□ -1.53
CLDN6P56747 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CLDN6P56747 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.52□□□□□ -1.53
CLDN6P56747 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CLDN6P56747 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLDN6P56747 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CLDN6P56747 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.52□□□□□ -1.53
CLDN6P56747 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLDN6P56747 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CLDN6P56747 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLDN6P56747 AL121768.1-201ENST00000613917 2544 ntBASIC5.51□□□□□ -1.53
CLDN6P56747 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
CLDN6P56747 AP002512.4-202ENST00000641599 4530 ntBASIC5.51□□□□□ -1.53
CLDN6P56747 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLDN6P56747 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLDN6P56747 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.51□□□□□ -1.53
CLDN6P56747 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CLDN6P56747 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CLDN6P56747 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.51□□□□□ -1.53
CLDN6P56747 RPL37P18-201ENST00000411602 243 ntBASIC5.51□□□□□ -1.53
CLDN6P56747 AC007562.1-201ENST00000421819 517 ntBASIC5.51□□□□□ -1.53
CLDN6P56747 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.51□□□□□ -1.53
CLDN6P56747 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.51□□□□□ -1.53
CLDN6P56747 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.51□□□□□ -1.53
CLDN6P56747 AC079922.1-201ENST00000443291 359 ntBASIC5.51□□□□□ -1.53
CLDN6P56747 AC023274.2-201ENST00000445264 521 ntBASIC5.51□□□□□ -1.53
CLDN6P56747 AL450996.1-201ENST00000445574 1202 ntBASIC5.51□□□□□ -1.53
CLDN6P56747 RAB28P2-201ENST00000454299 641 ntBASIC5.51□□□□□ -1.53
CLDN6P56747 LDHBP2-201ENST00000456969 1005 ntBASIC5.51□□□□□ -1.53
CLDN6P56747 RN7SL51P-201ENST00000468230 285 ntBASIC5.51□□□□□ -1.53
CLDN6P56747 AC087672.1-201ENST00000479876 766 ntBASIC5.51□□□□□ -1.53
CLDN6P56747 RPL38P3-201ENST00000484463 213 ntBASIC5.51□□□□□ -1.53
CLDN6P56747 EIF1P7-201ENST00000487533 337 ntBASIC5.51□□□□□ -1.53
CLDN6P56747 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.51□□□□□ -1.53
CLDN6P56747 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.51□□□□□ -1.53
CLDN6P56747 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.51□□□□□ -1.53
CLDN6P56747 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.51□□□□□ -1.53
CLDN6P56747 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.51□□□□□ -1.53
CLDN6P56747 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.51□□□□□ -1.53
CLDN6P56747 HSPE1P2-201ENST00000554777 306 ntBASIC5.51□□□□□ -1.53
CLDN6P56747 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.51□□□□□ -1.53
CLDN6P56747 MIR4260-201ENST00000583107 67 ntBASIC5.51□□□□□ -1.53
CLDN6P56747 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLDN6P56747 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.51□□□□□ -1.53
CLDN6P56747 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.51□□□□□ -1.53
CLDN6P56747 AC132068.1-201ENST00000623805 459 ntBASIC5.51□□□□□ -1.53
CLDN6P56747 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.51□□□□□ -1.53
CLDN6P56747 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
CLDN6P56747 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.51□□□□□ -1.53
CLDN6P56747 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLDN6P56747 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
CLDN6P56747 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CLDN6P56747 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CLDN6P56747 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CLDN6P56747 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CLDN6P56747 AC137056.2-201ENST00000624055 1958 ntBASIC5.51□□□□□ -1.53
CLDN6P56747 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.51□□□□□ -1.53
CLDN6P56747 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
CLDN6P56747 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
CLDN6P56747 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.51□□□□□ -1.53
CLDN6P56747 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.51□□□□□ -1.53
CLDN6P56747 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLDN6P56747 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.5□□□□□ -1.53
CLDN6P56747 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLDN6P56747 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLDN6P56747 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLDN6P56747 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CLDN6P56747 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLDN6P56747 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.5□□□□□ -1.53
CLDN6P56747 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CLDN6P56747 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.5□□□□□ -1.53
CLDN6P56747 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLDN6P56747 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.5□□□□□ -1.53
CLDN6P56747 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
CLDN6P56747 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CLDN6P56747 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLDN6P56747 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms