Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDH13P55290 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH13P55290 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH13P55290 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CDH13P55290 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH13P55290 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH13P55290 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH13P55290 AC011503.2-201ENST00000594230 1500 ntBASIC5.64□□□□□ -1.51
CDH13P55290 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.64□□□□□ -1.51
CDH13P55290 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.63□□□□□ -1.51
CDH13P55290 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDH13P55290 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDH13P55290 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
CDH13P55290 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.63□□□□□ -1.51
CDH13P55290 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDH13P55290 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CDH13P55290 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CDH13P55290 RNFT1P3-201ENST00000340898 1052 ntBASIC5.63□□□□□ -1.51
CDH13P55290 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDH13P55290 CXADRP1-201ENST00000398098 1095 ntBASIC5.63□□□□□ -1.51
CDH13P55290 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH13P55290 NPM1P37-201ENST00000403105 874 ntBASIC5.63□□□□□ -1.51
CDH13P55290 RN7SKP86-201ENST00000410454 332 ntBASIC5.63□□□□□ -1.51
CDH13P55290 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.63□□□□□ -1.51
CDH13P55290 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH13P55290 DEFA9P-201ENST00000433042 285 ntBASIC5.63□□□□□ -1.51
CDH13P55290 PNKDP1-201ENST00000435914 430 ntBASIC5.63□□□□□ -1.51
CDH13P55290 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH13P55290 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH13P55290 GEMIN2P1-201ENST00000454246 752 ntBASIC5.63□□□□□ -1.51
CDH13P55290 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.63□□□□□ -1.51
CDH13P55290 RN7SL612P-201ENST00000497704 295 ntBASIC5.63□□□□□ -1.51
CDH13P55290 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH13P55290 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDH13P55290 AC018797.1-201ENST00000510791 255 ntBASIC5.63□□□□□ -1.51
CDH13P55290 AC111000.6-201ENST00000514471 709 ntBASIC5.63□□□□□ -1.51
CDH13P55290 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH13P55290 IGLV3-30-201ENST00000524362 298 ntBASIC5.63□□□□□ -1.51
CDH13P55290 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH13P55290 OR8Q1P-201ENST00000526467 655 ntBASIC5.63□□□□□ -1.51
CDH13P55290 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH13P55290 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH13P55290 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH13P55290 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.63□□□□□ -1.51
CDH13P55290 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.63□□□□□ -1.51
CDH13P55290 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH13P55290 RPL12P48-201ENST00000605620 304 ntBASIC5.63□□□□□ -1.51
CDH13P55290 AL354696.1-201ENST00000614652 497 ntBASIC5.63□□□□□ -1.51
CDH13P55290 AC015712.7-201ENST00000615211 635 ntBASIC5.63□□□□□ -1.51
CDH13P55290 CXADRP3-202ENST00000617265 1100 ntBASIC5.63□□□□□ -1.51
CDH13P55290 AC020763.5-201ENST00000623298 430 ntBASIC5.63□□□□□ -1.51
CDH13P55290 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.63□□□□□ -1.51
CDH13P55290 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH13P55290 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDH13P55290 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
CDH13P55290 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDH13P55290 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDH13P55290 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH13P55290 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDH13P55290 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDH13P55290 QRSL1P1-201ENST00000400977 1540 ntBASIC5.63□□□□□ -1.51
CDH13P55290 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CDH13P55290 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDH13P55290 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDH13P55290 UGT2B24P-201ENST00000514441 1597 ntBASIC5.63□□□□□ -1.51
CDH13P55290 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDH13P55290 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
CDH13P55290 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH13P55290 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH13P55290 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.62□□□□□ -1.51
CDH13P55290 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.62□□□□□ -1.51
CDH13P55290 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDH13P55290 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.62□□□□□ -1.51
CDH13P55290 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDH13P55290 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDH13P55290 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.62□□□□□ -1.51
CDH13P55290 AC016739.1-201ENST00000405359 345 ntBASIC5.62□□□□□ -1.51
CDH13P55290 RN7SKP29-201ENST00000410957 272 ntBASIC5.62□□□□□ -1.51
CDH13P55290 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.62□□□□□ -1.51
CDH13P55290 SEPT7P8-201ENST00000413308 775 ntBASIC5.62□□□□□ -1.51
CDH13P55290 AL359885.1-201ENST00000415786 903 ntBASIC5.62□□□□□ -1.51
CDH13P55290 AL158827.1-201ENST00000416300 391 ntBASIC5.62□□□□□ -1.51
CDH13P55290 AC013470.3-201ENST00000420252 1194 ntBASIC5.62□□□□□ -1.51
CDH13P55290 AL445528.1-201ENST00000426330 420 ntBASIC5.62□□□□□ -1.51
CDH13P55290 VN1R21P-201ENST00000426703 765 ntBASIC5.62□□□□□ -1.51
CDH13P55290 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH13P55290 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CDH13P55290 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.62□□□□□ -1.51
CDH13P55290 AC099670.2-201ENST00000435130 321 ntBASIC5.62□□□□□ -1.51
CDH13P55290 AL513343.1-201ENST00000451818 792 ntBASIC5.62□□□□□ -1.51
CDH13P55290 AC073476.1-201ENST00000452854 407 ntBASIC5.62□□□□□ -1.51
CDH13P55290 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.62□□□□□ -1.51
CDH13P55290 TPRKBP1-201ENST00000456243 481 ntBASIC5.62□□□□□ -1.51
CDH13P55290 AC093166.4-201ENST00000457867 318 ntBASIC5.62□□□□□ -1.51
CDH13P55290 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.62□□□□□ -1.51
CDH13P55290 AC012123.2-201ENST00000485809 248 ntBASIC5.62□□□□□ -1.51
CDH13P55290 AC091874.2-201ENST00000505889 720 ntBASIC5.62□□□□□ -1.51
CDH13P55290 GAPDHP62-201ENST00000515313 990 ntBASIC5.62□□□□□ -1.51
CDH13P55290 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.62□□□□□ -1.51
CDH13P55290 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms