Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 RNF10P1-201ENST00000418589 369 ntBASIC5.81□□□□□ -1.48
CDH4P55283 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.81□□□□□ -1.48
CDH4P55283 REREP1Y-201ENST00000422655 198 ntBASIC5.81□□□□□ -1.48
CDH4P55283 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.81□□□□□ -1.48
CDH4P55283 REREP2Y-201ENST00000439103 200 ntBASIC5.81□□□□□ -1.48
CDH4P55283 BX679664.2-201ENST00000439282 283 ntBASIC5.81□□□□□ -1.48
CDH4P55283 AC023141.9-201ENST00000458734 412 ntBASIC5.81□□□□□ -1.48
CDH4P55283 RN7SL72P-201ENST00000460697 269 ntBASIC5.81□□□□□ -1.48
CDH4P55283 SNRPCP3-201ENST00000474888 476 ntBASIC5.81□□□□□ -1.48
CDH4P55283 RN7SL101P-201ENST00000496350 279 ntBASIC5.81□□□□□ -1.48
CDH4P55283 DUTP7-201ENST00000507982 486 ntBASIC5.81□□□□□ -1.48
CDH4P55283 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.81□□□□□ -1.48
CDH4P55283 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.81□□□□□ -1.48
CDH4P55283 NRBF2P4-201ENST00000520874 850 ntBASIC5.81□□□□□ -1.48
CDH4P55283 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.81□□□□□ -1.48
CDH4P55283 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.81□□□□□ -1.48
CDH4P55283 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.81□□□□□ -1.48
CDH4P55283 MIR4311-201ENST00000580794 100 ntBASIC5.81□□□□□ -1.48
CDH4P55283 AC060780.2-201ENST00000589047 198 ntBASIC5.81□□□□□ -1.48
CDH4P55283 AC011445.2-201ENST00000599274 173 ntBASIC5.81□□□□□ -1.48
CDH4P55283 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.81□□□□□ -1.48
CDH4P55283 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH4P55283 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.81□□□□□ -1.48
CDH4P55283 AL691477.1-201ENST00000624398 162 ntBASIC5.81□□□□□ -1.48
CDH4P55283 MIR4302-201ENST00000638058 60 ntBASIC5.81□□□□□ -1.48
CDH4P55283 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDH4P55283 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
CDH4P55283 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH4P55283 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDH4P55283 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CDH4P55283 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.81□□□□□ -1.48
CDH4P55283 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH4P55283 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH4P55283 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH4P55283 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH4P55283 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
CDH4P55283 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH4P55283 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.8□□□□□ -1.48
CDH4P55283 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.8□□□□□ -1.48
CDH4P55283 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
CDH4P55283 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CDH4P55283 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH4P55283 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.8□□□□□ -1.48
CDH4P55283 RN7SKP269-201ENST00000365545 319 ntBASIC5.8□□□□□ -1.48
CDH4P55283 RNU1-136P-201ENST00000384181 164 ntBASIC5.8□□□□□ -1.48
CDH4P55283 RN7SKP206-201ENST00000410823 293 ntBASIC5.8□□□□□ -1.48
CDH4P55283 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.8□□□□□ -1.48
CDH4P55283 OR6E1P-201ENST00000414424 923 ntBASIC5.8□□□□□ -1.48
CDH4P55283 RANP7-201ENST00000418085 644 ntBASIC5.8□□□□□ -1.48
CDH4P55283 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.8□□□□□ -1.48
CDH4P55283 TNPO1P1-201ENST00000423641 1138 ntBASIC5.8□□□□□ -1.48
CDH4P55283 CHEK2P5-201ENST00000423877 246 ntBASIC5.8□□□□□ -1.48
CDH4P55283 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.8□□□□□ -1.48
CDH4P55283 FMO7P-201ENST00000436045 768 ntBASIC5.8□□□□□ -1.48
CDH4P55283 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.8□□□□□ -1.48
CDH4P55283 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.8□□□□□ -1.48
CDH4P55283 AC073909.1-201ENST00000447112 999 ntBASIC5.8□□□□□ -1.48
CDH4P55283 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CDH4P55283 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.8□□□□□ -1.48
CDH4P55283 LDHBP2-201ENST00000456969 1005 ntBASIC5.8□□□□□ -1.48
CDH4P55283 RN7SL174P-201ENST00000475578 289 ntBASIC5.8□□□□□ -1.48
CDH4P55283 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.8□□□□□ -1.48
CDH4P55283 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.8□□□□□ -1.48
CDH4P55283 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.8□□□□□ -1.48
CDH4P55283 DHFRP1-201ENST00000579682 559 ntBASIC5.8□□□□□ -1.48
CDH4P55283 AC241377.1-201ENST00000619797 406 ntBASIC5.8□□□□□ -1.48
CDH4P55283 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH4P55283 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.8□□□□□ -1.48
CDH4P55283 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH4P55283 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.8□□□□□ -1.48
CDH4P55283 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH4P55283 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CDH4P55283 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.8□□□□□ -1.48
CDH4P55283 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH4P55283 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CDH4P55283 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.8□□□□□ -1.48
CDH4P55283 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.8□□□□□ -1.48
CDH4P55283 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH4P55283 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CDH4P55283 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.8□□□□□ -1.48
CDH4P55283 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.8□□□□□ -1.48
CDH4P55283 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.8□□□□□ -1.48
CDH4P55283 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CDH4P55283 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDH4P55283 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH4P55283 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH4P55283 PWAR1-201ENST00000624188 2414 ntBASIC5.79□□□□□ -1.48
CDH4P55283 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH4P55283 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH4P55283 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH4P55283 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.79□□□□□ -1.48
CDH4P55283 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH4P55283 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH4P55283 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
CDH4P55283 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.79□□□□□ -1.48
CDH4P55283 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH4P55283 AC092642.1-201ENST00000392417 425 ntBASIC5.79□□□□□ -1.48
CDH4P55283 METTL15P3-201ENST00000415522 1221 ntBASIC5.79□□□□□ -1.48
CDH4P55283 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH4P55283 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms