Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
EPHB3P54753 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.77□□□□□ -1.33
EPHB3P54753 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
EPHB3P54753 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC6.77□□□□□ -1.33
EPHB3P54753 SAGE3P-201ENST00000619800 1635 ntBASIC6.77□□□□□ -1.33
EPHB3P54753 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
EPHB3P54753 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC6.77□□□□□ -1.33
EPHB3P54753 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
EPHB3P54753 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
EPHB3P54753 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
EPHB3P54753 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC6.77□□□□□ -1.33
EPHB3P54753 SNORD16-201ENST00000362803 99 ntBASIC6.77□□□□□ -1.33
EPHB3P54753 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC6.77□□□□□ -1.33
EPHB3P54753 LYPLA1P3-201ENST00000402650 695 ntBASIC6.77□□□□□ -1.33
EPHB3P54753 SFR1P1-201ENST00000403720 688 ntBASIC6.77□□□□□ -1.33
EPHB3P54753 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.77□□□□□ -1.33
EPHB3P54753 RPL23AP18-201ENST00000416139 468 ntBASIC6.77□□□□□ -1.33
EPHB3P54753 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.77□□□□□ -1.33
EPHB3P54753 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.77□□□□□ -1.33
EPHB3P54753 KCTD9P1-201ENST00000430462 1167 ntBASIC6.77□□□□□ -1.33
EPHB3P54753 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC6.77□□□□□ -1.33
EPHB3P54753 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
EPHB3P54753 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.77□□□□□ -1.33
EPHB3P54753 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.77□□□□□ -1.33
EPHB3P54753 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
EPHB3P54753 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.77□□□□□ -1.33
EPHB3P54753 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.77□□□□□ -1.33
EPHB3P54753 NPM1P29-201ENST00000483112 803 ntBASIC6.77□□□□□ -1.33
EPHB3P54753 RPL21P131-201ENST00000497298 483 ntBASIC6.77□□□□□ -1.33
EPHB3P54753 RPF2P2-201ENST00000504693 896 ntBASIC6.77□□□□□ -1.33
EPHB3P54753 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.77□□□□□ -1.33
EPHB3P54753 GOLGA5P1-201ENST00000507317 980 ntBASIC6.77□□□□□ -1.33
EPHB3P54753 AC034244.1-201ENST00000507687 207 ntBASIC6.77□□□□□ -1.33
EPHB3P54753 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.77□□□□□ -1.33
EPHB3P54753 RNU6-1129P-201ENST00000515964 104 ntBASIC6.77□□□□□ -1.33
EPHB3P54753 RNU6-491P-201ENST00000516099 110 ntBASIC6.77□□□□□ -1.33
EPHB3P54753 IGHV3-57-201ENST00000520143 280 ntBASIC6.77□□□□□ -1.33
EPHB3P54753 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC6.77□□□□□ -1.33
EPHB3P54753 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.77□□□□□ -1.33
EPHB3P54753 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.77□□□□□ -1.33
EPHB3P54753 AC068135.2-201ENST00000569293 1028 ntBASIC6.77□□□□□ -1.33
EPHB3P54753 DYNLL1P1-201ENST00000595442 269 ntBASIC6.77□□□□□ -1.33
EPHB3P54753 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.77□□□□□ -1.33
EPHB3P54753 AC073046.2-201ENST00000604756 527 ntBASIC6.77□□□□□ -1.33
EPHB3P54753 AC073387.2-201ENST00000604797 784 ntBASIC6.77□□□□□ -1.33
EPHB3P54753 AC016727.1-205ENST00000605437 569 ntBASIC6.77□□□□□ -1.33
EPHB3P54753 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
EPHB3P54753 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
EPHB3P54753 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.77□□□□□ -1.33
EPHB3P54753 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.77□□□□□ -1.33
EPHB3P54753 MRPL57P1-201ENST00000621486 265 ntBASIC6.77□□□□□ -1.33
EPHB3P54753 AC073530.2-201ENST00000623987 261 ntBASIC6.77□□□□□ -1.33
EPHB3P54753 AC130448.2-201ENST00000624082 374 ntBASIC6.77□□□□□ -1.33
EPHB3P54753 AL390318.1-201ENST00000624564 687 ntBASIC6.77□□□□□ -1.33
EPHB3P54753 AC103706.2-201ENST00000638080 240 ntBASIC6.77□□□□□ -1.33
EPHB3P54753 AC139713.2-210ENST00000641741 992 ntBASIC6.77□□□□□ -1.33
EPHB3P54753 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
EPHB3P54753 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
EPHB3P54753 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
EPHB3P54753 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
EPHB3P54753 AL353743.3-201ENST00000442109 1468 ntBASIC6.77□□□□□ -1.33
EPHB3P54753 AC104966.1-201ENST00000467010 1464 ntBASIC6.77□□□□□ -1.33
EPHB3P54753 BX322650.1-201ENST00000332359 2143 ntBASIC6.77□□□□□ -1.33
EPHB3P54753 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
EPHB3P54753 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
EPHB3P54753 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
EPHB3P54753 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
EPHB3P54753 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
EPHB3P54753 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
EPHB3P54753 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.77□□□□□ -1.33
EPHB3P54753 SPATA31C1-201ENST00000420021 3895 ntBASIC6.76□□□□□ -1.33
EPHB3P54753 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
EPHB3P54753 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
EPHB3P54753 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.76□□□□□ -1.33
EPHB3P54753 MFSD8-217ENST00000641178 4374 ntBASIC6.76□□□□□ -1.33
EPHB3P54753 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.76□□□□□ -1.33
EPHB3P54753 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
EPHB3P54753 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.76□□□□□ -1.33
EPHB3P54753 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
EPHB3P54753 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC6.76□□□□□ -1.33
EPHB3P54753 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6.76□□□□□ -1.33
EPHB3P54753 AC004022.2-201ENST00000413824 193 ntBASIC6.76□□□□□ -1.33
EPHB3P54753 AL157884.1-201ENST00000424561 454 ntBASIC6.76□□□□□ -1.33
EPHB3P54753 AL354707.3-201ENST00000427308 331 ntBASIC6.76□□□□□ -1.33
EPHB3P54753 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.76□□□□□ -1.33
EPHB3P54753 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
EPHB3P54753 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.76□□□□□ -1.33
EPHB3P54753 AC073052.1-201ENST00000440417 714 ntBASIC6.76□□□□□ -1.33
EPHB3P54753 AC010240.2-201ENST00000445363 1205 ntBASIC6.76□□□□□ -1.33
EPHB3P54753 OR52I1-201ENST00000450052 1050 ntBASIC6.76□□□□□ -1.33
EPHB3P54753 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC6.76□□□□□ -1.33
EPHB3P54753 NDUFAF4P4-201ENST00000454883 502 ntBASIC6.76□□□□□ -1.33
EPHB3P54753 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC6.76□□□□□ -1.33
EPHB3P54753 AC092754.2-201ENST00000463506 460 ntBASIC6.76□□□□□ -1.33
EPHB3P54753 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.76□□□□□ -1.33
EPHB3P54753 RPL23AP64-201ENST00000469465 435 ntBASIC6.76□□□□□ -1.33
EPHB3P54753 RN7SL643P-201ENST00000471845 291 ntBASIC6.76□□□□□ -1.33
EPHB3P54753 DEFB109A-201ENST00000482450 265 ntBASIC6.76□□□□□ -1.33
EPHB3P54753 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.76□□□□□ -1.33
EPHB3P54753 RPL5P11-201ENST00000498068 893 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 240.2 ms