Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 LRRC37A14P-201ENST00000452297 462 ntBASIC5.65□□□□□ -1.5
PDX1P52945 RNU7-157P-201ENST00000459600 66 ntBASIC5.65□□□□□ -1.5
PDX1P52945 AC108693.1-201ENST00000496068 432 ntBASIC5.65□□□□□ -1.5
PDX1P52945 AC109481.1-201ENST00000509173 282 ntBASIC5.65□□□□□ -1.5
PDX1P52945 RNA5SP34-201ENST00000516887 130 ntBASIC5.65□□□□□ -1.5
PDX1P52945 SNORA43.3-201ENST00000517240 103 ntBASIC5.65□□□□□ -1.5
PDX1P52945 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC5.65□□□□□ -1.5
PDX1P52945 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
PDX1P52945 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PDX1P52945 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.65□□□□□ -1.5
PDX1P52945 IMMP1LP3-201ENST00000604197 224 ntBASIC5.65□□□□□ -1.5
PDX1P52945 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.65□□□□□ -1.5
PDX1P52945 uc_338.26-201ENST00000612659 160 ntBASIC5.65□□□□□ -1.5
PDX1P52945 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.65□□□□□ -1.5
PDX1P52945 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.65□□□□□ -1.5
PDX1P52945 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.65□□□□□ -1.5
PDX1P52945 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PDX1P52945 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
PDX1P52945 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PDX1P52945 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.65□□□□□ -1.51
PDX1P52945 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
PDX1P52945 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
PDX1P52945 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
PDX1P52945 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
PDX1P52945 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.65□□□□□ -1.51
PDX1P52945 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PDX1P52945 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.65□□□□□ -1.51
PDX1P52945 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.51
PDX1P52945 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.65□□□□□ -1.51
PDX1P52945 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDX1P52945 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
PDX1P52945 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
PDX1P52945 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.64□□□□□ -1.51
PDX1P52945 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.64□□□□□ -1.51
PDX1P52945 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDX1P52945 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.64□□□□□ -1.51
PDX1P52945 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDX1P52945 AC016583.1-201ENST00000624221 2431 ntBASIC5.64□□□□□ -1.51
PDX1P52945 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDX1P52945 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDX1P52945 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.64□□□□□ -1.51
PDX1P52945 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.64□□□□□ -1.51
PDX1P52945 RNA5SP514-201ENST00000363717 111 ntBASIC5.64□□□□□ -1.51
PDX1P52945 RNU6-171P-201ENST00000384354 107 ntBASIC5.64□□□□□ -1.51
PDX1P52945 AL589994.1-201ENST00000404962 340 ntBASIC5.64□□□□□ -1.51
PDX1P52945 DHFRP5-201ENST00000406944 564 ntBASIC5.64□□□□□ -1.51
PDX1P52945 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.64□□□□□ -1.51
PDX1P52945 DPPA2P3-201ENST00000411853 655 ntBASIC5.64□□□□□ -1.51
PDX1P52945 NME1P1-201ENST00000420914 382 ntBASIC5.64□□□□□ -1.51
PDX1P52945 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.64□□□□□ -1.51
PDX1P52945 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.64□□□□□ -1.51
PDX1P52945 HMGB3P24-201ENST00000433260 622 ntBASIC5.64□□□□□ -1.51
PDX1P52945 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.64□□□□□ -1.51
PDX1P52945 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.64□□□□□ -1.51
PDX1P52945 SDC4P-201ENST00000453285 601 ntBASIC5.64□□□□□ -1.51
PDX1P52945 AC011225.1-201ENST00000457751 369 ntBASIC5.64□□□□□ -1.51
PDX1P52945 AL157777.1-201ENST00000468100 304 ntBASIC5.64□□□□□ -1.51
PDX1P52945 SIAH1P1-201ENST00000479411 923 ntBASIC5.64□□□□□ -1.51
PDX1P52945 RN7SL184P-201ENST00000488308 297 ntBASIC5.64□□□□□ -1.51
PDX1P52945 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.64□□□□□ -1.51
PDX1P52945 MTND2P31-201ENST00000512602 616 ntBASIC5.64□□□□□ -1.51
PDX1P52945 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.64□□□□□ -1.51
PDX1P52945 OR4A6P-201ENST00000534364 970 ntBASIC5.64□□□□□ -1.51
PDX1P52945 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.64□□□□□ -1.51
PDX1P52945 TXNP4-201ENST00000575018 310 ntBASIC5.64□□□□□ -1.51
PDX1P52945 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.64□□□□□ -1.51
PDX1P52945 AL138960.1-201ENST00000613838 513 ntBASIC5.64□□□□□ -1.51
PDX1P52945 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.64□□□□□ -1.51
PDX1P52945 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.64□□□□□ -1.51
PDX1P52945 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDX1P52945 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDX1P52945 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
PDX1P52945 AC114876.1-201ENST00000490962 1366 ntBASIC5.64□□□□□ -1.51
PDX1P52945 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDX1P52945 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDX1P52945 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDX1P52945 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDX1P52945 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDX1P52945 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.64□□□□□ -1.51
PDX1P52945 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PDX1P52945 AC083843.2-201ENST00000568248 6253 ntBASIC5.63□□□□□ -1.51
PDX1P52945 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PDX1P52945 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
PDX1P52945 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
PDX1P52945 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDX1P52945 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PDX1P52945 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDX1P52945 RN7SKP124-201ENST00000364730 341 ntBASIC5.63□□□□□ -1.51
PDX1P52945 RNA5SP211-201ENST00000365516 117 ntBASIC5.63□□□□□ -1.51
PDX1P52945 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.63□□□□□ -1.51
PDX1P52945 MIR937-201ENST00000401271 86 ntBASIC5.63□□□□□ -1.51
PDX1P52945 MTND3P20-201ENST00000407663 186 ntBASIC5.63□□□□□ -1.51
PDX1P52945 RPS26P38-201ENST00000414476 348 ntBASIC5.63□□□□□ -1.51
PDX1P52945 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.63□□□□□ -1.51
PDX1P52945 RPL23AP18-201ENST00000416139 468 ntBASIC5.63□□□□□ -1.51
PDX1P52945 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.63□□□□□ -1.51
PDX1P52945 AC007394.1-201ENST00000421941 531 ntBASIC5.63□□□□□ -1.51
PDX1P52945 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.63□□□□□ -1.51
PDX1P52945 AC099677.3-201ENST00000427081 395 ntBASIC5.63□□□□□ -1.51
PDX1P52945 RPS12P17-201ENST00000438591 377 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms