Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CX3CR1P49238 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
CX3CR1P49238 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CX3CR1P49238 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5□□□□□ -1.61
CX3CR1P49238 EEF1A1P33-201ENST00000554413 1362 ntBASIC5□□□□□ -1.61
CX3CR1P49238 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5□□□□□ -1.61
CX3CR1P49238 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5□□□□□ -1.61
CX3CR1P49238 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5□□□□□ -1.61
CX3CR1P49238 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
CX3CR1P49238 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5□□□□□ -1.61
CX3CR1P49238 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CX3CR1P49238 UGT2B24P-201ENST00000514441 1597 ntBASIC4.99□□□□□ -1.61
CX3CR1P49238 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CX3CR1P49238 CDC27P2-201ENST00000425026 1922 ntBASIC4.99□□□□□ -1.61
CX3CR1P49238 NAMPTP1-201ENST00000440465 2514 ntBASIC4.99□□□□□ -1.61
CX3CR1P49238 AP001029.2-203ENST00000589795 4910 ntBASIC4.99□□□□□ -1.61
CX3CR1P49238 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
CX3CR1P49238 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CX3CR1P49238 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.99□□□□□ -1.61
CX3CR1P49238 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
CX3CR1P49238 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CX3CR1P49238 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC4.99□□□□□ -1.61
CX3CR1P49238 AP001284.1-201ENST00000528393 2118 ntBASIC4.99□□□□□ -1.61
CX3CR1P49238 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CX3CR1P49238 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
CX3CR1P49238 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.99□□□□□ -1.61
CX3CR1P49238 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.99□□□□□ -1.61
CX3CR1P49238 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CX3CR1P49238 AC002525.1-201ENST00000624392 1622 ntBASIC4.99□□□□□ -1.61
CX3CR1P49238 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CX3CR1P49238 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.99□□□□□ -1.61
CX3CR1P49238 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CX3CR1P49238 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.99□□□□□ -1.61
CX3CR1P49238 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.99□□□□□ -1.61
CX3CR1P49238 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.99□□□□□ -1.61
CX3CR1P49238 MRPL53P1-201ENST00000414323 319 ntBASIC4.99□□□□□ -1.61
CX3CR1P49238 AC079809.1-201ENST00000415468 276 ntBASIC4.99□□□□□ -1.61
CX3CR1P49238 NIFKP3-201ENST00000417799 865 ntBASIC4.99□□□□□ -1.61
CX3CR1P49238 DPPA2P2-201ENST00000418220 897 ntBASIC4.99□□□□□ -1.61
CX3CR1P49238 AL034379.1-201ENST00000423216 253 ntBASIC4.99□□□□□ -1.61
CX3CR1P49238 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.99□□□□□ -1.61
CX3CR1P49238 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.99□□□□□ -1.61
CX3CR1P49238 TMEM183AP1-205ENST00000432739 290 ntBASIC4.99□□□□□ -1.61
CX3CR1P49238 VN1R110P-201ENST00000438988 971 ntBASIC4.99□□□□□ -1.61
CX3CR1P49238 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC4.99□□□□□ -1.61
CX3CR1P49238 AC091544.1-201ENST00000484702 348 ntBASIC4.99□□□□□ -1.61
CX3CR1P49238 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.99□□□□□ -1.61
CX3CR1P49238 AL117692.1-201ENST00000494283 713 ntBASIC4.99□□□□□ -1.61
CX3CR1P49238 LSM3P4-201ENST00000502948 309 ntBASIC4.99□□□□□ -1.61
CX3CR1P49238 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.99□□□□□ -1.61
CX3CR1P49238 APOBEC3AP1-201ENST00000511396 287 ntBASIC4.99□□□□□ -1.61
CX3CR1P49238 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.99□□□□□ -1.61
CX3CR1P49238 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC4.99□□□□□ -1.61
CX3CR1P49238 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC4.99□□□□□ -1.61
CX3CR1P49238 BCAS2P1-201ENST00000528022 632 ntBASIC4.99□□□□□ -1.61
CX3CR1P49238 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC4.99□□□□□ -1.61
CX3CR1P49238 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC4.99□□□□□ -1.61
CX3CR1P49238 AC137627.1-201ENST00000545761 289 ntBASIC4.99□□□□□ -1.61
CX3CR1P49238 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC4.99□□□□□ -1.61
CX3CR1P49238 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.99□□□□□ -1.61
CX3CR1P49238 AL356801.1-201ENST00000559320 294 ntBASIC4.99□□□□□ -1.61
CX3CR1P49238 AC026826.3-201ENST00000561747 158 ntBASIC4.99□□□□□ -1.61
CX3CR1P49238 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.99□□□□□ -1.61
CX3CR1P49238 AC096996.1-201ENST00000563813 325 ntBASIC4.99□□□□□ -1.61
CX3CR1P49238 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.99□□□□□ -1.61
CX3CR1P49238 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC4.99□□□□□ -1.61
CX3CR1P49238 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.99□□□□□ -1.61
CX3CR1P49238 COX6CP7-201ENST00000597056 208 ntBASIC4.99□□□□□ -1.61
CX3CR1P49238 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.99□□□□□ -1.61
CX3CR1P49238 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC4.99□□□□□ -1.61
CX3CR1P49238 AL359091.2-201ENST00000609303 556 ntBASIC4.99□□□□□ -1.61
CX3CR1P49238 MIR6889-201ENST00000613185 59 ntBASIC4.99□□□□□ -1.61
CX3CR1P49238 AC090607.5-201ENST00000615692 224 ntBASIC4.99□□□□□ -1.61
CX3CR1P49238 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC4.99□□□□□ -1.61
CX3CR1P49238 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.99□□□□□ -1.61
CX3CR1P49238 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.99□□□□□ -1.61
CX3CR1P49238 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
CX3CR1P49238 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CX3CR1P49238 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
CX3CR1P49238 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.99□□□□□ -1.61
CX3CR1P49238 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
CX3CR1P49238 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CX3CR1P49238 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CX3CR1P49238 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CX3CR1P49238 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CX3CR1P49238 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CX3CR1P49238 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC4.98□□□□□ -1.61
CX3CR1P49238 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CX3CR1P49238 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.98□□□□□ -1.61
CX3CR1P49238 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.98□□□□□ -1.61
CX3CR1P49238 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CX3CR1P49238 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CX3CR1P49238 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CX3CR1P49238 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CX3CR1P49238 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CX3CR1P49238 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC4.98□□□□□ -1.61
CX3CR1P49238 RN7SKP145-201ENST00000363291 303 ntBASIC4.98□□□□□ -1.61
CX3CR1P49238 RNA5SP500-201ENST00000364486 119 ntBASIC4.98□□□□□ -1.61
CX3CR1P49238 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CX3CR1P49238 RNU6-167P-201ENST00000384292 106 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms