Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.32□□□□□ -1.56
RFC3P40938 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.32□□□□□ -1.56
RFC3P40938 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
RFC3P40938 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RFC3P40938 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.31□□□□□ -1.56
RFC3P40938 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RFC3P40938 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RFC3P40938 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
RFC3P40938 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.31□□□□□ -1.56
RFC3P40938 AP004607.3-201ENST00000530354 3915 ntBASIC5.31□□□□□ -1.56
RFC3P40938 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RFC3P40938 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RFC3P40938 SNORA64.1-201ENST00000362600 132 ntBASIC5.31□□□□□ -1.56
RFC3P40938 AC093155.2-201ENST00000420734 937 ntBASIC5.31□□□□□ -1.56
RFC3P40938 RPL34P3-201ENST00000421454 338 ntBASIC5.31□□□□□ -1.56
RFC3P40938 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.31□□□□□ -1.56
RFC3P40938 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.31□□□□□ -1.56
RFC3P40938 RPL12P18-201ENST00000437175 325 ntBASIC5.31□□□□□ -1.56
RFC3P40938 AL162739.1-201ENST00000450606 307 ntBASIC5.31□□□□□ -1.56
RFC3P40938 RPL7L1P3-201ENST00000455249 689 ntBASIC5.31□□□□□ -1.56
RFC3P40938 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.31□□□□□ -1.56
RFC3P40938 MRE11P1-201ENST00000464884 2127 ntBASIC5.31□□□□□ -1.56
RFC3P40938 RPL38P3-201ENST00000484463 213 ntBASIC5.31□□□□□ -1.56
RFC3P40938 AC008945.1-201ENST00000505144 499 ntBASIC5.31□□□□□ -1.56
RFC3P40938 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.31□□□□□ -1.56
RFC3P40938 SNORA43.3-201ENST00000517240 103 ntBASIC5.31□□□□□ -1.56
RFC3P40938 AC020937.1-201ENST00000519677 1013 ntBASIC5.31□□□□□ -1.56
RFC3P40938 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RFC3P40938 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.31□□□□□ -1.56
RFC3P40938 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.31□□□□□ -1.56
RFC3P40938 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RFC3P40938 AC145423.1-201ENST00000605712 336 ntBASIC5.31□□□□□ -1.56
RFC3P40938 FAM72A-208ENST00000607379 1139 ntBASIC5.31□□□□□ -1.56
RFC3P40938 OR51C1P-201ENST00000608504 942 ntBASIC5.31□□□□□ -1.56
RFC3P40938 RN7SL544P-201ENST00000617232 284 ntBASIC5.31□□□□□ -1.56
RFC3P40938 RN7SL763P-201ENST00000620922 284 ntBASIC5.31□□□□□ -1.56
RFC3P40938 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.31□□□□□ -1.56
RFC3P40938 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.31□□□□□ -1.56
RFC3P40938 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.31□□□□□ -1.56
RFC3P40938 AC005261.2-201ENST00000593427 4258 ntBASIC5.31□□□□□ -1.56
RFC3P40938 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
RFC3P40938 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RFC3P40938 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RFC3P40938 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.31□□□□□ -1.56
RFC3P40938 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.31□□□□□ -1.56
RFC3P40938 AL137141.1-201ENST00000624622 4836 ntBASIC5.31□□□□□ -1.56
RFC3P40938 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
RFC3P40938 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RFC3P40938 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFC3P40938 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.3□□□□□ -1.56
RFC3P40938 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFC3P40938 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.3□□□□□ -1.56
RFC3P40938 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFC3P40938 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.3□□□□□ -1.56
RFC3P40938 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFC3P40938 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFC3P40938 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RFC3P40938 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
RFC3P40938 AC007842.1-201ENST00000597336 2039 ntBASIC5.3□□□□□ -1.56
RFC3P40938 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFC3P40938 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RFC3P40938 OR13C1P-202ENST00000641378 2919 ntBASIC5.3□□□□□ -1.56
RFC3P40938 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
RFC3P40938 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
RFC3P40938 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RFC3P40938 RMRPP5-201ENST00000411156 267 ntBASIC5.3□□□□□ -1.56
RFC3P40938 MYL6P5-201ENST00000412707 459 ntBASIC5.3□□□□□ -1.56
RFC3P40938 AL357752.1-201ENST00000412817 349 ntBASIC5.3□□□□□ -1.56
RFC3P40938 SDHDP6-201ENST00000414693 480 ntBASIC5.3□□□□□ -1.56
RFC3P40938 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.3□□□□□ -1.56
RFC3P40938 GTF3AP1-201ENST00000416942 1004 ntBASIC5.3□□□□□ -1.56
RFC3P40938 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.3□□□□□ -1.56
RFC3P40938 AL365220.1-201ENST00000432923 399 ntBASIC5.3□□□□□ -1.56
RFC3P40938 AC002504.1-201ENST00000438281 691 ntBASIC5.3□□□□□ -1.56
RFC3P40938 AL603882.1-201ENST00000463059 681 ntBASIC5.3□□□□□ -1.56
RFC3P40938 AC090589.1-201ENST00000473109 362 ntBASIC5.3□□□□□ -1.56
RFC3P40938 AC022215.1-201ENST00000481770 362 ntBASIC5.3□□□□□ -1.56
RFC3P40938 RPL32P33-201ENST00000487023 394 ntBASIC5.3□□□□□ -1.56
RFC3P40938 RN7SL214P-201ENST00000487317 265 ntBASIC5.3□□□□□ -1.56
RFC3P40938 AL136038.1-201ENST00000497246 351 ntBASIC5.3□□□□□ -1.56
RFC3P40938 MORF4L2P1-201ENST00000503761 858 ntBASIC5.3□□□□□ -1.56
RFC3P40938 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.3□□□□□ -1.56
RFC3P40938 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.3□□□□□ -1.56
RFC3P40938 SCARNA6.1-201ENST00000516989 238 ntBASIC5.3□□□□□ -1.56
RFC3P40938 TMEM97P2-201ENST00000517841 403 ntBASIC5.3□□□□□ -1.56
RFC3P40938 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.3□□□□□ -1.56
RFC3P40938 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.3□□□□□ -1.56
RFC3P40938 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.3□□□□□ -1.56
RFC3P40938 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.3□□□□□ -1.56
RFC3P40938 AC091078.2-201ENST00000557145 559 ntBASIC5.3□□□□□ -1.56
RFC3P40938 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.3□□□□□ -1.56
RFC3P40938 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.3□□□□□ -1.56
RFC3P40938 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.3□□□□□ -1.56
RFC3P40938 MIR4489-201ENST00000578869 62 ntBASIC5.3□□□□□ -1.56
RFC3P40938 MIR4505-201ENST00000582238 73 ntBASIC5.3□□□□□ -1.56
RFC3P40938 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.3□□□□□ -1.56
RFC3P40938 AC107993.1-201ENST00000591343 684 ntBASIC5.3□□□□□ -1.56
RFC3P40938 MIR6826-201ENST00000617808 98 ntBASIC5.3□□□□□ -1.56
RFC3P40938 AL353684.1-201ENST00000622677 1120 ntBASIC5.3□□□□□ -1.56
RFC3P40938 AC022919.1-201ENST00000624979 626 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms