Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 MTND5P12-201ENST00000502851 1449 ntBASIC5.65□□□□□ -1.5
HMGCLP35914 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HMGCLP35914 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
HMGCLP35914 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMGCLP35914 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.65□□□□□ -1.5
HMGCLP35914 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HMGCLP35914 ICE2P1-201ENST00000512800 1849 ntBASIC5.65□□□□□ -1.5
HMGCLP35914 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
HMGCLP35914 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.65□□□□□ -1.5
HMGCLP35914 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.65□□□□□ -1.5
HMGCLP35914 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMGCLP35914 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMGCLP35914 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
HMGCLP35914 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
HMGCLP35914 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMGCLP35914 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
HMGCLP35914 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
HMGCLP35914 RN7SKP17-201ENST00000411242 351 ntBASIC5.65□□□□□ -1.5
HMGCLP35914 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGCLP35914 RPS6P23-201ENST00000413224 722 ntBASIC5.65□□□□□ -1.5
HMGCLP35914 SDHDP6-201ENST00000414693 480 ntBASIC5.65□□□□□ -1.5
HMGCLP35914 BMS1P17-202ENST00000416720 316 ntBASIC5.65□□□□□ -1.5
HMGCLP35914 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.65□□□□□ -1.5
HMGCLP35914 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.65□□□□□ -1.5
HMGCLP35914 BX119321.1-201ENST00000428912 797 ntBASIC5.65□□□□□ -1.5
HMGCLP35914 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HMGCLP35914 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.65□□□□□ -1.5
HMGCLP35914 RPS29P14-201ENST00000431518 171 ntBASIC5.65□□□□□ -1.5
HMGCLP35914 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.65□□□□□ -1.5
HMGCLP35914 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.65□□□□□ -1.5
HMGCLP35914 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGCLP35914 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.65□□□□□ -1.5
HMGCLP35914 SNORD125-201ENST00000459538 96 ntBASIC5.65□□□□□ -1.5
HMGCLP35914 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
HMGCLP35914 AC117394.1-201ENST00000477323 567 ntBASIC5.65□□□□□ -1.5
HMGCLP35914 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGCLP35914 DUTP7-201ENST00000507982 486 ntBASIC5.65□□□□□ -1.5
HMGCLP35914 GAPDHP62-201ENST00000515313 990 ntBASIC5.65□□□□□ -1.5
HMGCLP35914 SNORA43.3-201ENST00000517240 103 ntBASIC5.65□□□□□ -1.5
HMGCLP35914 IGLV3-24-201ENST00000517477 197 ntBASIC5.65□□□□□ -1.5
HMGCLP35914 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.65□□□□□ -1.5
HMGCLP35914 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.65□□□□□ -1.5
HMGCLP35914 AC009962.1-201ENST00000567327 3813 ntBASIC5.65□□□□□ -1.5
HMGCLP35914 AP001357.1-201ENST00000586304 1053 ntBASIC5.65□□□□□ -1.5
HMGCLP35914 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.65□□□□□ -1.5
HMGCLP35914 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.65□□□□□ -1.5
HMGCLP35914 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HMGCLP35914 RNA5SP439-201ENST00000617595 124 ntBASIC5.65□□□□□ -1.5
HMGCLP35914 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMGCLP35914 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGCLP35914 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HMGCLP35914 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMGCLP35914 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
HMGCLP35914 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HMGCLP35914 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.65□□□□□ -1.51
HMGCLP35914 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HMGCLP35914 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HMGCLP35914 SAMM50P1-201ENST00000455403 1399 ntBASIC5.65□□□□□ -1.51
HMGCLP35914 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HMGCLP35914 LINC02019-201ENST00000608605 2060 ntBASIC5.65□□□□□ -1.51
HMGCLP35914 AC097063.1-201ENST00000426714 1797 ntBASIC5.65□□□□□ -1.51
HMGCLP35914 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HMGCLP35914 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
HMGCLP35914 SRRM1P3-201ENST00000426911 2678 ntBASIC5.64□□□□□ -1.51
HMGCLP35914 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
HMGCLP35914 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
HMGCLP35914 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMGCLP35914 PWAR1-201ENST00000624188 2414 ntBASIC5.64□□□□□ -1.51
HMGCLP35914 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
HMGCLP35914 AC010266.2-201ENST00000564741 3255 ntBASIC5.64□□□□□ -1.51
HMGCLP35914 HSPD1P7-201ENST00000447985 1686 ntBASIC5.64□□□□□ -1.51
HMGCLP35914 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
HMGCLP35914 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMGCLP35914 RNA5SP46-201ENST00000362370 120 ntBASIC5.64□□□□□ -1.51
HMGCLP35914 AC005042.1-201ENST00000393397 800 ntBASIC5.64□□□□□ -1.51
HMGCLP35914 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.64□□□□□ -1.51
HMGCLP35914 CDY17P-201ENST00000414121 1282 ntBASIC5.64□□□□□ -1.51
HMGCLP35914 TRGV5P-201ENST00000419915 354 ntBASIC5.64□□□□□ -1.51
HMGCLP35914 AL662874.1-201ENST00000426065 230 ntBASIC5.64□□□□□ -1.51
HMGCLP35914 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.64□□□□□ -1.51
HMGCLP35914 TMEM183AP1-205ENST00000432739 290 ntBASIC5.64□□□□□ -1.51
HMGCLP35914 Z84478.1-201ENST00000438230 1219 ntBASIC5.64□□□□□ -1.51
HMGCLP35914 SUMO2P3-201ENST00000438311 288 ntBASIC5.64□□□□□ -1.51
HMGCLP35914 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.64□□□□□ -1.51
HMGCLP35914 ATP5LP5-201ENST00000483050 299 ntBASIC5.64□□□□□ -1.51
HMGCLP35914 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.64□□□□□ -1.51
HMGCLP35914 AC097486.1-201ENST00000515331 210 ntBASIC5.64□□□□□ -1.51
HMGCLP35914 PMS2P3-207ENST00000529061 717 ntBASIC5.64□□□□□ -1.51
HMGCLP35914 AC084824.2-201ENST00000548906 345 ntBASIC5.64□□□□□ -1.51
HMGCLP35914 AC007066.2-202ENST00000566531 914 ntBASIC5.64□□□□□ -1.51
HMGCLP35914 AC010547.6-201ENST00000571789 193 ntBASIC5.64□□□□□ -1.51
HMGCLP35914 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.64□□□□□ -1.51
HMGCLP35914 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.64□□□□□ -1.51
HMGCLP35914 AP001962.1-201ENST00000624114 559 ntBASIC5.64□□□□□ -1.51
HMGCLP35914 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.64□□□□□ -1.51
HMGCLP35914 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMGCLP35914 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
HMGCLP35914 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
HMGCLP35914 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HMGCLP35914 AP005435.3-201ENST00000531260 3198 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 157.2 ms