Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC13P31276 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC13P31276 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC13P31276 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HOXC13P31276 OR13C1P-202ENST00000641378 2919 ntBASIC6.15□□□□□ -1.42
HOXC13P31276 AC093849.1-201ENST00000563631 2209 ntBASIC6.15□□□□□ -1.42
HOXC13P31276 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.42
HOXC13P31276 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HOXC13P31276 WDR95P-201ENST00000425638 1542 ntBASIC6.15□□□□□ -1.42
HOXC13P31276 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HOXC13P31276 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.15□□□□□ -1.42
HOXC13P31276 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HOXC13P31276 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HOXC13P31276 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HOXC13P31276 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HOXC13P31276 SNORA64.1-201ENST00000362600 132 ntBASIC6.15□□□□□ -1.42
HOXC13P31276 RN7SKP160-201ENST00000363804 340 ntBASIC6.15□□□□□ -1.42
HOXC13P31276 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.15□□□□□ -1.42
HOXC13P31276 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
HOXC13P31276 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.15□□□□□ -1.42
HOXC13P31276 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.15□□□□□ -1.42
HOXC13P31276 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.15□□□□□ -1.42
HOXC13P31276 NPM1P22-201ENST00000427761 952 ntBASIC6.15□□□□□ -1.42
HOXC13P31276 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.15□□□□□ -1.42
HOXC13P31276 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.15□□□□□ -1.42
HOXC13P31276 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.15□□□□□ -1.42
HOXC13P31276 OR7L1P-201ENST00000456181 380 ntBASIC6.15□□□□□ -1.42
HOXC13P31276 RPL32P9-201ENST00000487963 407 ntBASIC6.15□□□□□ -1.42
HOXC13P31276 OR9N1P-201ENST00000491296 333 ntBASIC6.15□□□□□ -1.42
HOXC13P31276 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.15□□□□□ -1.42
HOXC13P31276 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.15□□□□□ -1.42
HOXC13P31276 AP000648.1-201ENST00000529682 397 ntBASIC6.15□□□□□ -1.42
HOXC13P31276 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC6.15□□□□□ -1.42
HOXC13P31276 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.15□□□□□ -1.42
HOXC13P31276 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.15□□□□□ -1.42
HOXC13P31276 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.15□□□□□ -1.42
HOXC13P31276 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC6.15□□□□□ -1.42
HOXC13P31276 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.15□□□□□ -1.42
HOXC13P31276 AC104695.2-201ENST00000605056 775 ntBASIC6.15□□□□□ -1.42
HOXC13P31276 AL031601.1-201ENST00000605702 394 ntBASIC6.15□□□□□ -1.42
HOXC13P31276 AC239803.2-201ENST00000610161 430 ntBASIC6.15□□□□□ -1.42
HOXC13P31276 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.15□□□□□ -1.42
HOXC13P31276 AL035661.1-201ENST00000620459 1144 ntBASIC6.15□□□□□ -1.42
HOXC13P31276 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
HOXC13P31276 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.43
HOXC13P31276 AC109780.1-201ENST00000451768 1344 ntBASIC6.15□□□□□ -1.43
HOXC13P31276 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
HOXC13P31276 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
HOXC13P31276 AC130304.1-201ENST00000622942 2385 ntBASIC6.15□□□□□ -1.43
HOXC13P31276 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.15□□□□□ -1.43
HOXC13P31276 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.15□□□□□ -1.43
HOXC13P31276 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.15□□□□□ -1.43
HOXC13P31276 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HOXC13P31276 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXC13P31276 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.14□□□□□ -1.43
HOXC13P31276 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HOXC13P31276 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
HOXC13P31276 AC003985.2-201ENST00000562268 1669 ntBASIC6.14□□□□□ -1.43
HOXC13P31276 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
HOXC13P31276 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXC13P31276 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
HOXC13P31276 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
HOXC13P31276 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXC13P31276 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXC13P31276 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXC13P31276 SELENOWP1-201ENST00000322792 252 ntBASIC6.14□□□□□ -1.43
HOXC13P31276 SNORA70.9-201ENST00000384370 135 ntBASIC6.14□□□□□ -1.43
HOXC13P31276 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC6.14□□□□□ -1.43
HOXC13P31276 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.14□□□□□ -1.43
HOXC13P31276 AC099677.3-201ENST00000427081 395 ntBASIC6.14□□□□□ -1.43
HOXC13P31276 AL365220.1-201ENST00000432923 399 ntBASIC6.14□□□□□ -1.43
HOXC13P31276 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.14□□□□□ -1.43
HOXC13P31276 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.14□□□□□ -1.43
HOXC13P31276 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.14□□□□□ -1.43
HOXC13P31276 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.14□□□□□ -1.43
HOXC13P31276 MYO5BP2-201ENST00000449815 1277 ntBASIC6.14□□□□□ -1.43
HOXC13P31276 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.14□□□□□ -1.43
HOXC13P31276 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXC13P31276 ACA64.4-201ENST00000459070 127 ntBASIC6.14□□□□□ -1.43
HOXC13P31276 RPSAP37-201ENST00000470913 821 ntBASIC6.14□□□□□ -1.43
HOXC13P31276 AL122020.1-201ENST00000472287 459 ntBASIC6.14□□□□□ -1.43
HOXC13P31276 AC008953.1-201ENST00000497334 318 ntBASIC6.14□□□□□ -1.43
HOXC13P31276 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.14□□□□□ -1.43
HOXC13P31276 HNRNPRP2-201ENST00000528421 743 ntBASIC6.14□□□□□ -1.43
HOXC13P31276 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.14□□□□□ -1.43
HOXC13P31276 OR4A42P-201ENST00000531397 938 ntBASIC6.14□□□□□ -1.43
HOXC13P31276 AC079600.1-201ENST00000550326 297 ntBASIC6.14□□□□□ -1.43
HOXC13P31276 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXC13P31276 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.14□□□□□ -1.43
HOXC13P31276 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.14□□□□□ -1.43
HOXC13P31276 uc_338.26-201ENST00000612659 160 ntBASIC6.14□□□□□ -1.43
HOXC13P31276 AC016769.4-201ENST00000616893 535 ntBASIC6.14□□□□□ -1.43
HOXC13P31276 AC069234.4-201ENST00000621276 412 ntBASIC6.14□□□□□ -1.43
HOXC13P31276 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXC13P31276 AC005725.1-201ENST00000577346 2607 ntBASIC6.14□□□□□ -1.43
HOXC13P31276 AC235565.1-201ENST00000456962 1325 ntBASIC6.14□□□□□ -1.43
HOXC13P31276 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
HOXC13P31276 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXC13P31276 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
HOXC13P31276 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms