Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.66□□□□□ -1.5
ABCD3P28288 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ABCD3P28288 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
ABCD3P28288 HSPD1P9-201ENST00000420325 1636 ntBASIC5.66□□□□□ -1.5
ABCD3P28288 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.66□□□□□ -1.5
ABCD3P28288 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
ABCD3P28288 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ABCD3P28288 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
ABCD3P28288 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ABCD3P28288 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
ABCD3P28288 AC104966.1-201ENST00000467010 1464 ntBASIC5.65□□□□□ -1.5
ABCD3P28288 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
ABCD3P28288 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.65□□□□□ -1.5
ABCD3P28288 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.5
ABCD3P28288 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.65□□□□□ -1.5
ABCD3P28288 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.65□□□□□ -1.5
ABCD3P28288 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
ABCD3P28288 ZNF733P-202ENST00000444809 1573 ntBASIC5.65□□□□□ -1.5
ABCD3P28288 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
ABCD3P28288 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.65□□□□□ -1.5
ABCD3P28288 RNU1-134P-201ENST00000362935 165 ntBASIC5.65□□□□□ -1.5
ABCD3P28288 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.65□□□□□ -1.5
ABCD3P28288 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.65□□□□□ -1.5
ABCD3P28288 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
ABCD3P28288 AL132875.1-201ENST00000403623 949 ntBASIC5.65□□□□□ -1.5
ABCD3P28288 HMGA1P8-201ENST00000414130 321 ntBASIC5.65□□□□□ -1.5
ABCD3P28288 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.65□□□□□ -1.5
ABCD3P28288 RPL35AP31-201ENST00000418340 337 ntBASIC5.65□□□□□ -1.5
ABCD3P28288 RPS17P17-201ENST00000419392 409 ntBASIC5.65□□□□□ -1.5
ABCD3P28288 AC007562.1-201ENST00000421819 517 ntBASIC5.65□□□□□ -1.5
ABCD3P28288 OR5W1P-201ENST00000423705 938 ntBASIC5.65□□□□□ -1.5
ABCD3P28288 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
ABCD3P28288 HSPE1P16-201ENST00000426640 348 ntBASIC5.65□□□□□ -1.5
ABCD3P28288 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.65□□□□□ -1.5
ABCD3P28288 UBE2V1P6-201ENST00000430840 422 ntBASIC5.65□□□□□ -1.5
ABCD3P28288 AC007679.3-201ENST00000434035 414 ntBASIC5.65□□□□□ -1.5
ABCD3P28288 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.65□□□□□ -1.5
ABCD3P28288 ZNF736P1Y-201ENST00000440402 1276 ntBASIC5.65□□□□□ -1.5
ABCD3P28288 AC079922.1-201ENST00000443291 359 ntBASIC5.65□□□□□ -1.5
ABCD3P28288 AC023274.2-201ENST00000445264 521 ntBASIC5.65□□□□□ -1.5
ABCD3P28288 AC097463.1-201ENST00000447288 481 ntBASIC5.65□□□□□ -1.5
ABCD3P28288 AC112187.1-201ENST00000455837 479 ntBASIC5.65□□□□□ -1.5
ABCD3P28288 AC073610.1-201ENST00000489971 396 ntBASIC5.65□□□□□ -1.5
ABCD3P28288 RPL37P23-201ENST00000492641 294 ntBASIC5.65□□□□□ -1.5
ABCD3P28288 OR4A17P-201ENST00000526032 904 ntBASIC5.65□□□□□ -1.5
ABCD3P28288 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.65□□□□□ -1.5
ABCD3P28288 BCAS2P1-201ENST00000528022 632 ntBASIC5.65□□□□□ -1.5
ABCD3P28288 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.65□□□□□ -1.5
ABCD3P28288 AC006512.2-201ENST00000543250 486 ntBASIC5.65□□□□□ -1.5
ABCD3P28288 AL358913.1-201ENST00000554342 121 ntBASIC5.65□□□□□ -1.5
ABCD3P28288 AL049870.4-201ENST00000555741 486 ntBASIC5.65□□□□□ -1.5
ABCD3P28288 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
ABCD3P28288 AC092332.1-201ENST00000563684 829 ntBASIC5.65□□□□□ -1.5
ABCD3P28288 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.65□□□□□ -1.5
ABCD3P28288 RNU4ATAC-201ENST00000580972 127 ntBASIC5.65□□□□□ -1.5
ABCD3P28288 MIR4271-201ENST00000582451 67 ntBASIC5.65□□□□□ -1.5
ABCD3P28288 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.65□□□□□ -1.5
ABCD3P28288 AC020916.2-201ENST00000591242 360 ntBASIC5.65□□□□□ -1.5
ABCD3P28288 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.65□□□□□ -1.5
ABCD3P28288 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.65□□□□□ -1.5
ABCD3P28288 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.65□□□□□ -1.5
ABCD3P28288 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.65□□□□□ -1.5
ABCD3P28288 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.65□□□□□ -1.5
ABCD3P28288 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.65□□□□□ -1.51
ABCD3P28288 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
ABCD3P28288 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
ABCD3P28288 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
ABCD3P28288 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
ABCD3P28288 DNM1P47-203ENST00000571780 12667 ntBASIC5.65□□□□□ -1.51
ABCD3P28288 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
ABCD3P28288 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
ABCD3P28288 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.65□□□□□ -1.51
ABCD3P28288 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
ABCD3P28288 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.64□□□□□ -1.51
ABCD3P28288 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
ABCD3P28288 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
ABCD3P28288 TCP1P3-201ENST00000414406 1498 ntBASIC5.64□□□□□ -1.51
ABCD3P28288 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
ABCD3P28288 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.64□□□□□ -1.51
ABCD3P28288 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ABCD3P28288 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.64□□□□□ -1.51
ABCD3P28288 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ABCD3P28288 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.64□□□□□ -1.51
ABCD3P28288 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ABCD3P28288 HSPD1P8-201ENST00000400121 1658 ntBASIC5.64□□□□□ -1.51
ABCD3P28288 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ABCD3P28288 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
ABCD3P28288 LCN1P2-201ENST00000372030 223 ntBASIC5.64□□□□□ -1.51
ABCD3P28288 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.64□□□□□ -1.51
ABCD3P28288 VN1R12P-201ENST00000403778 876 ntBASIC5.64□□□□□ -1.51
ABCD3P28288 TATDN1P1-201ENST00000414123 891 ntBASIC5.64□□□□□ -1.51
ABCD3P28288 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.64□□□□□ -1.51
ABCD3P28288 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.64□□□□□ -1.51
ABCD3P28288 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.64□□□□□ -1.51
ABCD3P28288 PNKDP1-201ENST00000435914 430 ntBASIC5.64□□□□□ -1.51
ABCD3P28288 AC023141.3-201ENST00000436698 278 ntBASIC5.64□□□□□ -1.51
ABCD3P28288 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC5.64□□□□□ -1.51
ABCD3P28288 AL353662.1-201ENST00000439099 327 ntBASIC5.64□□□□□ -1.51
ABCD3P28288 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.64□□□□□ -1.51
ABCD3P28288 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms