Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CD28P10747 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CD28P10747 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC4.48□□□□□ -1.69
CD28P10747 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CD28P10747 GAPDHP24-201ENST00000328713 983 ntBASIC4.48□□□□□ -1.69
CD28P10747 RNU6-673P-201ENST00000365084 104 ntBASIC4.48□□□□□ -1.69
CD28P10747 RNA5-8SP5-201ENST00000365304 152 ntBASIC4.48□□□□□ -1.69
CD28P10747 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC4.48□□□□□ -1.69
CD28P10747 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.48□□□□□ -1.69
CD28P10747 RPS26P38-201ENST00000414476 348 ntBASIC4.48□□□□□ -1.69
CD28P10747 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.48□□□□□ -1.69
CD28P10747 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.48□□□□□ -1.69
CD28P10747 CFL1P1-202ENST00000432948 411 ntBASIC4.48□□□□□ -1.69
CD28P10747 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.48□□□□□ -1.69
CD28P10747 AL450996.1-201ENST00000445574 1202 ntBASIC4.48□□□□□ -1.69
CD28P10747 AC007386.1-201ENST00000455212 582 ntBASIC4.48□□□□□ -1.69
CD28P10747 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CD28P10747 AC017007.3-201ENST00000479865 435 ntBASIC4.48□□□□□ -1.69
CD28P10747 AC087672.1-201ENST00000479876 766 ntBASIC4.48□□□□□ -1.69
CD28P10747 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.48□□□□□ -1.69
CD28P10747 IGHVIII-47-1-201ENST00000518187 331 ntBASIC4.48□□□□□ -1.69
CD28P10747 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.48□□□□□ -1.69
CD28P10747 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.48□□□□□ -1.69
CD28P10747 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CD28P10747 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC4.48□□□□□ -1.69
CD28P10747 OR7E18P-201ENST00000592589 702 ntBASIC4.48□□□□□ -1.69
CD28P10747 SUMO2P15-201ENST00000604285 278 ntBASIC4.48□□□□□ -1.69
CD28P10747 MIR6719-201ENST00000622428 87 ntBASIC4.48□□□□□ -1.69
CD28P10747 AC069542.2-201ENST00000624816 216 ntBASIC4.48□□□□□ -1.69
CD28P10747 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
CD28P10747 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CD28P10747 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC4.48□□□□□ -1.69
CD28P10747 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CD28P10747 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.48□□□□□ -1.69
CD28P10747 NCOA4P2-201ENST00000340589 1813 ntBASIC4.48□□□□□ -1.69
CD28P10747 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CD28P10747 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CD28P10747 AC123769.1-201ENST00000530992 3192 ntBASIC4.48□□□□□ -1.69
CD28P10747 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CD28P10747 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC4.48□□□□□ -1.69
CD28P10747 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CD28P10747 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
CD28P10747 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC4.47□□□□□ -1.69
CD28P10747 ATP5A1P4-201ENST00000556888 1605 ntBASIC4.47□□□□□ -1.69
CD28P10747 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC4.47□□□□□ -1.69
CD28P10747 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.47□□□□□ -1.69
CD28P10747 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CD28P10747 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CD28P10747 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CD28P10747 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CD28P10747 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CD28P10747 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CD28P10747 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.47□□□□□ -1.69
CD28P10747 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CD28P10747 AC019205.1-201ENST00000421830 730 ntBASIC4.47□□□□□ -1.69
CD28P10747 AC113412.1-201ENST00000425840 504 ntBASIC4.47□□□□□ -1.69
CD28P10747 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.47□□□□□ -1.69
CD28P10747 BX679664.2-201ENST00000439282 283 ntBASIC4.47□□□□□ -1.69
CD28P10747 SPRYD7P1-201ENST00000443861 570 ntBASIC4.47□□□□□ -1.69
CD28P10747 AL163193.1-201ENST00000444895 788 ntBASIC4.47□□□□□ -1.69
CD28P10747 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CD28P10747 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC4.47□□□□□ -1.69
CD28P10747 AL445687.2-201ENST00000458156 728 ntBASIC4.47□□□□□ -1.69
CD28P10747 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.47□□□□□ -1.69
CD28P10747 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC4.47□□□□□ -1.69
CD28P10747 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.47□□□□□ -1.69
CD28P10747 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.47□□□□□ -1.69
CD28P10747 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.47□□□□□ -1.69
CD28P10747 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CD28P10747 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC4.47□□□□□ -1.69
CD28P10747 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CD28P10747 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.47□□□□□ -1.69
CD28P10747 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CD28P10747 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.47□□□□□ -1.69
CD28P10747 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CD28P10747 RBM22P12-201ENST00000567098 1255 ntBASIC4.47□□□□□ -1.69
CD28P10747 MIR1269B-201ENST00000580405 75 ntBASIC4.47□□□□□ -1.69
CD28P10747 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC4.47□□□□□ -1.69
CD28P10747 AC063977.5-201ENST00000601044 974 ntBASIC4.47□□□□□ -1.69
CD28P10747 AP001267.4-201ENST00000602598 545 ntBASIC4.47□□□□□ -1.69
CD28P10747 AC119501.1-201ENST00000603646 475 ntBASIC4.47□□□□□ -1.69
CD28P10747 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.47□□□□□ -1.69
CD28P10747 AL352984.2-202ENST00000613699 155 ntBASIC4.47□□□□□ -1.69
CD28P10747 AL138960.1-201ENST00000613838 513 ntBASIC4.47□□□□□ -1.69
CD28P10747 AC007204.2-201ENST00000615022 616 ntBASIC4.47□□□□□ -1.69
CD28P10747 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC4.47□□□□□ -1.69
CD28P10747 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.47□□□□□ -1.69
CD28P10747 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.47□□□□□ -1.69
CD28P10747 CASC19-248ENST00000641674 1356 ntBASIC4.47□□□□□ -1.69
CD28P10747 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
CD28P10747 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CD28P10747 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CD28P10747 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC4.47□□□□□ -1.69
CD28P10747 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC4.47□□□□□ -1.69
CD28P10747 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC4.47□□□□□ -1.69
CD28P10747 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CD28P10747 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC4.47□□□□□ -1.69
CD28P10747 AC130304.1-201ENST00000622942 2385 ntBASIC4.47□□□□□ -1.69
CD28P10747 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CD28P10747 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC4.46□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms