Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC6.45□□□□□ -1.38
HOXC6P09630 AC096775.1-201ENST00000437724 448 ntBASIC6.45□□□□□ -1.38
HOXC6P09630 AC245047.2-201ENST00000441060 530 ntBASIC6.45□□□□□ -1.38
HOXC6P09630 RSL24D1P2-201ENST00000445584 366 ntBASIC6.45□□□□□ -1.38
HOXC6P09630 RPL15P21-201ENST00000495592 567 ntBASIC6.45□□□□□ -1.38
HOXC6P09630 RN7SL808P-201ENST00000496066 299 ntBASIC6.45□□□□□ -1.38
HOXC6P09630 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.45□□□□□ -1.38
HOXC6P09630 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.45□□□□□ -1.38
HOXC6P09630 AC008676.3-201ENST00000521237 435 ntBASIC6.45□□□□□ -1.38
HOXC6P09630 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC6.45□□□□□ -1.38
HOXC6P09630 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.45□□□□□ -1.38
HOXC6P09630 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.45□□□□□ -1.38
HOXC6P09630 AC012616.1-201ENST00000600294 197 ntBASIC6.45□□□□□ -1.38
HOXC6P09630 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.45□□□□□ -1.38
HOXC6P09630 AC092953.2-201ENST00000608000 699 ntBASIC6.45□□□□□ -1.38
HOXC6P09630 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.45□□□□□ -1.38
HOXC6P09630 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.45□□□□□ -1.38
HOXC6P09630 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.45□□□□□ -1.38
HOXC6P09630 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC6P09630 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC6P09630 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
HOXC6P09630 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC6P09630 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC6P09630 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
HOXC6P09630 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.45□□□□□ -1.38
HOXC6P09630 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
HOXC6P09630 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.45□□□□□ -1.38
HOXC6P09630 AL161912.4-201ENST00000623889 2468 ntBASIC6.44□□□□□ -1.38
HOXC6P09630 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HOXC6P09630 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.44□□□□□ -1.38
HOXC6P09630 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HOXC6P09630 AL033543.1-201ENST00000623440 13454 ntBASIC6.44□□□□□ -1.38
HOXC6P09630 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HOXC6P09630 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HOXC6P09630 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.44□□□□□ -1.38
HOXC6P09630 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HOXC6P09630 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
HOXC6P09630 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HOXC6P09630 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.44□□□□□ -1.38
HOXC6P09630 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.44□□□□□ -1.38
HOXC6P09630 RN7SKP213-201ENST00000410746 298 ntBASIC6.44□□□□□ -1.38
HOXC6P09630 LDHAP2-201ENST00000437325 985 ntBASIC6.44□□□□□ -1.38
HOXC6P09630 AC006335.2-201ENST00000437993 330 ntBASIC6.44□□□□□ -1.38
HOXC6P09630 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.44□□□□□ -1.38
HOXC6P09630 RPL12P3-201ENST00000440080 396 ntBASIC6.44□□□□□ -1.38
HOXC6P09630 AC004129.2-201ENST00000457229 287 ntBASIC6.44□□□□□ -1.38
HOXC6P09630 AL445687.2-201ENST00000458156 728 ntBASIC6.44□□□□□ -1.38
HOXC6P09630 RN7SKP288-201ENST00000516227 268 ntBASIC6.44□□□□□ -1.38
HOXC6P09630 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
HOXC6P09630 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.44□□□□□ -1.38
HOXC6P09630 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.44□□□□□ -1.38
HOXC6P09630 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.44□□□□□ -1.38
HOXC6P09630 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.44□□□□□ -1.38
HOXC6P09630 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.44□□□□□ -1.38
HOXC6P09630 AL354950.1-201ENST00000614150 568 ntBASIC6.44□□□□□ -1.38
HOXC6P09630 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.44□□□□□ -1.38
HOXC6P09630 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
HOXC6P09630 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
HOXC6P09630 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HOXC6P09630 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
HOXC6P09630 WBP11P1-201ENST00000562560 1931 ntBASIC6.44□□□□□ -1.38
HOXC6P09630 FBXL21-201ENST00000297158 1305 ntBASIC6.44□□□□□ -1.38
HOXC6P09630 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
HOXC6P09630 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.44□□□□□ -1.38
HOXC6P09630 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.44□□□□□ -1.38
HOXC6P09630 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.44□□□□□ -1.38
HOXC6P09630 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HOXC6P09630 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
HOXC6P09630 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
HOXC6P09630 AC020656.2-201ENST00000613291 5309 ntBASIC6.43□□□□□ -1.38
HOXC6P09630 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.43□□□□□ -1.38
HOXC6P09630 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.43□□□□□ -1.38
HOXC6P09630 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HOXC6P09630 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HOXC6P09630 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
HOXC6P09630 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HOXC6P09630 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.43□□□□□ -1.38
HOXC6P09630 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
HOXC6P09630 AC005725.1-201ENST00000577346 2607 ntBASIC6.43□□□□□ -1.38
HOXC6P09630 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HOXC6P09630 SNORD1C-201ENST00000363315 78 ntBASIC6.43□□□□□ -1.38
HOXC6P09630 RNA5SP514-201ENST00000363717 111 ntBASIC6.43□□□□□ -1.38
HOXC6P09630 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.43□□□□□ -1.38
HOXC6P09630 RBMY2KP-201ENST00000418221 992 ntBASIC6.43□□□□□ -1.38
HOXC6P09630 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.43□□□□□ -1.38
HOXC6P09630 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.43□□□□□ -1.38
HOXC6P09630 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
HOXC6P09630 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC6.43□□□□□ -1.38
HOXC6P09630 MTCO3P17-201ENST00000443775 513 ntBASIC6.43□□□□□ -1.38
HOXC6P09630 FAR2P1-206ENST00000449736 709 ntBASIC6.43□□□□□ -1.38
HOXC6P09630 AL645937.3-201ENST00000453647 936 ntBASIC6.43□□□□□ -1.38
HOXC6P09630 SLC25A51P1-201ENST00000468432 871 ntBASIC6.43□□□□□ -1.38
HOXC6P09630 RPL7AP6-201ENST00000477943 801 ntBASIC6.43□□□□□ -1.38
HOXC6P09630 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.43□□□□□ -1.38
HOXC6P09630 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.43□□□□□ -1.38
HOXC6P09630 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
HOXC6P09630 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
HOXC6P09630 CDH12P4-201ENST00000517835 295 ntBASIC6.43□□□□□ -1.38
HOXC6P09630 CDH12P3-201ENST00000517935 295 ntBASIC6.43□□□□□ -1.38
HOXC6P09630 CDH12P1-201ENST00000518435 295 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms