Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
HMGB1P09429 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC7.41□□□□□ -1.22
HMGB1P09429 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC7.41□□□□□ -1.22
HMGB1P09429 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC7.41□□□□□ -1.22
HMGB1P09429 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HMGB1P09429 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.41□□□□□ -1.22
HMGB1P09429 RN7SKP224-201ENST00000364140 325 ntBASIC7.41□□□□□ -1.22
HMGB1P09429 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
HMGB1P09429 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC7.41□□□□□ -1.22
HMGB1P09429 AC003045.1-201ENST00000398779 713 ntBASIC7.41□□□□□ -1.22
HMGB1P09429 PRELID1P1-201ENST00000403549 660 ntBASIC7.41□□□□□ -1.22
HMGB1P09429 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
HMGB1P09429 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC7.41□□□□□ -1.22
HMGB1P09429 ALDH7A1P4-201ENST00000412255 178 ntBASIC7.41□□□□□ -1.22
HMGB1P09429 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
HMGB1P09429 AC009965.2-201ENST00000425328 970 ntBASIC7.41□□□□□ -1.22
HMGB1P09429 SEC63P1-201ENST00000425785 1258 ntBASIC7.41□□□□□ -1.22
HMGB1P09429 AC073508.1-201ENST00000428866 656 ntBASIC7.41□□□□□ -1.22
HMGB1P09429 BMP6P1-201ENST00000431230 679 ntBASIC7.41□□□□□ -1.22
HMGB1P09429 AC112492.2-201ENST00000432774 1030 ntBASIC7.41□□□□□ -1.22
HMGB1P09429 PPIAP13-201ENST00000434706 478 ntBASIC7.41□□□□□ -1.22
HMGB1P09429 RPS20P1-201ENST00000434853 354 ntBASIC7.41□□□□□ -1.22
HMGB1P09429 AL356121.1-201ENST00000442911 156 ntBASIC7.41□□□□□ -1.22
HMGB1P09429 AC245291.3-201ENST00000443400 292 ntBASIC7.41□□□□□ -1.22
HMGB1P09429 AL353718.1-201ENST00000451028 517 ntBASIC7.41□□□□□ -1.22
HMGB1P09429 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC7.41□□□□□ -1.22
HMGB1P09429 CEACAMP11-201ENST00000455211 583 ntBASIC7.41□□□□□ -1.22
HMGB1P09429 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC7.41□□□□□ -1.22
HMGB1P09429 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC7.41□□□□□ -1.22
HMGB1P09429 AC114728.1-201ENST00000488289 483 ntBASIC7.41□□□□□ -1.22
HMGB1P09429 SNRPCP11-201ENST00000492453 205 ntBASIC7.41□□□□□ -1.22
HMGB1P09429 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC7.41□□□□□ -1.22
HMGB1P09429 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
HMGB1P09429 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC7.41□□□□□ -1.22
HMGB1P09429 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC7.41□□□□□ -1.22
HMGB1P09429 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC7.41□□□□□ -1.22
HMGB1P09429 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC7.41□□□□□ -1.22
HMGB1P09429 TXNP4-201ENST00000575018 310 ntBASIC7.41□□□□□ -1.22
HMGB1P09429 AC027229.1-201ENST00000583887 253 ntBASIC7.41□□□□□ -1.22
HMGB1P09429 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC7.41□□□□□ -1.22
HMGB1P09429 AC024023.1-201ENST00000624530 922 ntBASIC7.41□□□□□ -1.22
HMGB1P09429 AC003992.1-201ENST00000635364 557 ntBASIC7.41□□□□□ -1.22
HMGB1P09429 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.41□□□□□ -1.22
HMGB1P09429 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
HMGB1P09429 CASC19-248ENST00000641674 1356 ntBASIC7.41□□□□□ -1.22
HMGB1P09429 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
HMGB1P09429 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
HMGB1P09429 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
HMGB1P09429 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
HMGB1P09429 NLRP3P1-201ENST00000622303 1785 ntBASIC7.41□□□□□ -1.22
HMGB1P09429 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC7.41□□□□□ -1.22
HMGB1P09429 AP001541.1-201ENST00000623322 1904 ntBASIC7.4□□□□□ -1.22
HMGB1P09429 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
HMGB1P09429 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
HMGB1P09429 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
HMGB1P09429 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
HMGB1P09429 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
HMGB1P09429 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
HMGB1P09429 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
HMGB1P09429 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
HMGB1P09429 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
HMGB1P09429 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
HMGB1P09429 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
HMGB1P09429 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
HMGB1P09429 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
HMGB1P09429 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
HMGB1P09429 BMS1P3-201ENST00000372011 932 ntBASIC7.4□□□□□ -1.22
HMGB1P09429 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
HMGB1P09429 RN7SKP121-201ENST00000410842 305 ntBASIC7.4□□□□□ -1.22
HMGB1P09429 MRPS21P2-201ENST00000424704 264 ntBASIC7.4□□□□□ -1.22
HMGB1P09429 RPS7P14-201ENST00000426405 583 ntBASIC7.4□□□□□ -1.22
HMGB1P09429 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC7.4□□□□□ -1.22
HMGB1P09429 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
HMGB1P09429 RPL12P46-201ENST00000436610 195 ntBASIC7.4□□□□□ -1.22
HMGB1P09429 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC7.4□□□□□ -1.22
HMGB1P09429 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC7.4□□□□□ -1.22
HMGB1P09429 H3F3AP5-201ENST00000475267 429 ntBASIC7.4□□□□□ -1.22
HMGB1P09429 AC093815.1-201ENST00000508637 280 ntBASIC7.4□□□□□ -1.22
HMGB1P09429 AC138517.1-201ENST00000515724 568 ntBASIC7.4□□□□□ -1.22
HMGB1P09429 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
HMGB1P09429 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC7.4□□□□□ -1.22
HMGB1P09429 OR4A17P-201ENST00000526032 904 ntBASIC7.4□□□□□ -1.22
HMGB1P09429 OSBPL9P3-201ENST00000534523 595 ntBASIC7.4□□□□□ -1.22
HMGB1P09429 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC7.4□□□□□ -1.22
HMGB1P09429 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
HMGB1P09429 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC7.4□□□□□ -1.22
HMGB1P09429 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC7.4□□□□□ -1.22
HMGB1P09429 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC7.4□□□□□ -1.22
HMGB1P09429 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
HMGB1P09429 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC7.4□□□□□ -1.22
HMGB1P09429 AL671309.1-201ENST00000603750 544 ntBASIC7.4□□□□□ -1.22
HMGB1P09429 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC7.4□□□□□ -1.22
HMGB1P09429 U1.25-201ENST00000614085 162 ntBASIC7.4□□□□□ -1.22
HMGB1P09429 MIR7973-1-201ENST00000614683 76 ntBASIC7.4□□□□□ -1.22
HMGB1P09429 AC089999.3-201ENST00000622440 577 ntBASIC7.4□□□□□ -1.22
HMGB1P09429 AP006248.3-201ENST00000623580 594 ntBASIC7.4□□□□□ -1.22
HMGB1P09429 AL356094.1-201ENST00000624663 1212 ntBASIC7.4□□□□□ -1.22
HMGB1P09429 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC7.4□□□□□ -1.22
HMGB1P09429 FRG1DP-201ENST00000635586 771 ntBASIC7.4□□□□□ -1.22
HMGB1P09429 HDAC1P2-201ENST00000453661 1398 ntBASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms