Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HOXC4P09017 AC079395.2-201ENST00000610982 737 ntBASIC5.56□□□□□ -1.52
HOXC4P09017 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.56□□□□□ -1.52
HOXC4P09017 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HOXC4P09017 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXC4P09017 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXC4P09017 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXC4P09017 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
HOXC4P09017 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.56□□□□□ -1.52
HOXC4P09017 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.56□□□□□ -1.52
HOXC4P09017 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.56□□□□□ -1.52
HOXC4P09017 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
HOXC4P09017 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.56□□□□□ -1.52
HOXC4P09017 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXC4P09017 AC125336.1-201ENST00000508893 2827 ntBASIC5.56□□□□□ -1.52
HOXC4P09017 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.56□□□□□ -1.52
HOXC4P09017 AC020656.2-201ENST00000613291 5309 ntBASIC5.55□□□□□ -1.52
HOXC4P09017 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC4P09017 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.55□□□□□ -1.52
HOXC4P09017 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC4P09017 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXC4P09017 Z95114.1-201ENST00000624264 14574 ntBASIC5.55□□□□□ -1.52
HOXC4P09017 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC4P09017 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC4P09017 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.55□□□□□ -1.52
HOXC4P09017 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC4P09017 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
HOXC4P09017 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC4P09017 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC4P09017 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HOXC4P09017 RNU1-136P-201ENST00000384181 164 ntBASIC5.55□□□□□ -1.52
HOXC4P09017 MIR551A-201ENST00000385042 96 ntBASIC5.55□□□□□ -1.52
HOXC4P09017 RPS6P23-201ENST00000413224 722 ntBASIC5.55□□□□□ -1.52
HOXC4P09017 MARK2P12-201ENST00000420129 585 ntBASIC5.55□□□□□ -1.52
HOXC4P09017 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.55□□□□□ -1.52
HOXC4P09017 NPM1P25-201ENST00000429734 854 ntBASIC5.55□□□□□ -1.52
HOXC4P09017 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.55□□□□□ -1.52
HOXC4P09017 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXC4P09017 EIF3LP3-201ENST00000495197 822 ntBASIC5.55□□□□□ -1.52
HOXC4P09017 IGLV3-24-201ENST00000517477 197 ntBASIC5.55□□□□□ -1.52
HOXC4P09017 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC4P09017 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.55□□□□□ -1.52
HOXC4P09017 AC139697.1-201ENST00000548429 745 ntBASIC5.55□□□□□ -1.52
HOXC4P09017 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.55□□□□□ -1.52
HOXC4P09017 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.55□□□□□ -1.52
HOXC4P09017 AP000864.1-201ENST00000609424 650 ntBASIC5.55□□□□□ -1.52
HOXC4P09017 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.55□□□□□ -1.52
HOXC4P09017 AC007204.2-201ENST00000615022 616 ntBASIC5.55□□□□□ -1.52
HOXC4P09017 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC4P09017 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.55□□□□□ -1.52
HOXC4P09017 AC132068.1-201ENST00000623805 459 ntBASIC5.55□□□□□ -1.52
HOXC4P09017 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HOXC4P09017 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC4P09017 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC4P09017 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC4P09017 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC4P09017 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
HOXC4P09017 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HOXC4P09017 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXC4P09017 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HOXC4P09017 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
HOXC4P09017 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.54□□□□□ -1.52
HOXC4P09017 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.54□□□□□ -1.52
HOXC4P09017 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC4P09017 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
HOXC4P09017 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC4P09017 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC4P09017 AC015799.1-201ENST00000622996 3122 ntBASIC5.54□□□□□ -1.52
HOXC4P09017 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC4P09017 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC4P09017 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC4P09017 RNA5SP319-201ENST00000362768 119 ntBASIC5.54□□□□□ -1.52
HOXC4P09017 RN7SKP28-201ENST00000364770 305 ntBASIC5.54□□□□□ -1.52
HOXC4P09017 RN7SKP6-201ENST00000364795 319 ntBASIC5.54□□□□□ -1.52
HOXC4P09017 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC4P09017 KRT8P51-201ENST00000438938 274 ntBASIC5.54□□□□□ -1.52
HOXC4P09017 BX679664.2-201ENST00000439282 283 ntBASIC5.54□□□□□ -1.52
HOXC4P09017 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC4P09017 AC019185.1-201ENST00000442718 389 ntBASIC5.54□□□□□ -1.52
HOXC4P09017 SERPINA7P1-201ENST00000443077 631 ntBASIC5.54□□□□□ -1.52
HOXC4P09017 VDAC2P4-201ENST00000452925 711 ntBASIC5.54□□□□□ -1.52
HOXC4P09017 AC100832.1-201ENST00000471945 383 ntBASIC5.54□□□□□ -1.52
HOXC4P09017 SIAH1P1-201ENST00000479411 923 ntBASIC5.54□□□□□ -1.52
HOXC4P09017 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.54□□□□□ -1.52
HOXC4P09017 SNORA70.11-201ENST00000515987 138 ntBASIC5.54□□□□□ -1.52
HOXC4P09017 SNORA70.13-201ENST00000516116 138 ntBASIC5.54□□□□□ -1.52
HOXC4P09017 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC4P09017 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC4P09017 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC4P09017 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC4P09017 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC4P09017 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC4P09017 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC4P09017 DHFRP1-201ENST00000579682 559 ntBASIC5.54□□□□□ -1.52
HOXC4P09017 H3F3BP2-201ENST00000583907 357 ntBASIC5.54□□□□□ -1.52
HOXC4P09017 AC012616.1-201ENST00000600294 197 ntBASIC5.54□□□□□ -1.52
HOXC4P09017 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXC4P09017 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC4P09017 AC025574.2-201ENST00000615621 514 ntBASIC5.54□□□□□ -1.52
HOXC4P09017 MIR6826-201ENST00000617808 98 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms