Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DPB1P04440 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DPB1P04440 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.04□□□□□ -1.6
HLA-DPB1P04440 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.04□□□□□ -1.6
HLA-DPB1P04440 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-DPB1P04440 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
HLA-DPB1P04440 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DPB1P04440 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
HLA-DPB1P04440 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HLA-DPB1P04440 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DPB1P04440 AC005042.1-201ENST00000393397 800 ntBASIC5.04□□□□□ -1.6
HLA-DPB1P04440 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
HLA-DPB1P04440 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DPB1P04440 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-DPB1P04440 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DPB1P04440 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
HLA-DPB1P04440 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-DPB1P04440 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DPB1P04440 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.04□□□□□ -1.6
HLA-DPB1P04440 RN7SL193P-201ENST00000491708 276 ntBASIC5.04□□□□□ -1.6
HLA-DPB1P04440 AL049874.2-201ENST00000492636 288 ntBASIC5.04□□□□□ -1.6
HLA-DPB1P04440 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-DPB1P04440 LSM3P4-201ENST00000502948 309 ntBASIC5.04□□□□□ -1.6
HLA-DPB1P04440 AC098976.1-201ENST00000513014 541 ntBASIC5.04□□□□□ -1.6
HLA-DPB1P04440 AC005363.1-201ENST00000530779 351 ntBASIC5.04□□□□□ -1.6
HLA-DPB1P04440 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.04□□□□□ -1.6
HLA-DPB1P04440 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DPB1P04440 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.04□□□□□ -1.6
HLA-DPB1P04440 MIR4776-2-201ENST00000580204 80 ntBASIC5.04□□□□□ -1.6
HLA-DPB1P04440 AL499605.1-201ENST00000604628 403 ntBASIC5.04□□□□□ -1.6
HLA-DPB1P04440 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.04□□□□□ -1.6
HLA-DPB1P04440 OR11H2-202ENST00000641517 1085 ntBASIC5.04□□□□□ -1.6
HLA-DPB1P04440 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
HLA-DPB1P04440 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
HLA-DPB1P04440 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.04□□□□□ -1.6
HLA-DPB1P04440 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-DPB1P04440 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-DPB1P04440 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DPB1P04440 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DPB1P04440 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DPB1P04440 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DPB1P04440 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-DPB1P04440 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DPB1P04440 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DPB1P04440 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DPB1P04440 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.03□□□□□ -1.6
HLA-DPB1P04440 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DPB1P04440 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DPB1P04440 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.03□□□□□ -1.6
HLA-DPB1P04440 RNA5SP273-201ENST00000362484 113 ntBASIC5.03□□□□□ -1.6
HLA-DPB1P04440 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DPB1P04440 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DPB1P04440 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DPB1P04440 KIF4CP-201ENST00000422742 1279 ntBASIC5.03□□□□□ -1.6
HLA-DPB1P04440 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DPB1P04440 DEFA9P-201ENST00000433042 285 ntBASIC5.03□□□□□ -1.6
HLA-DPB1P04440 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DPB1P04440 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DPB1P04440 TUBB4BP6-201ENST00000437576 479 ntBASIC5.03□□□□□ -1.6
HLA-DPB1P04440 AC073465.2-201ENST00000440938 498 ntBASIC5.03□□□□□ -1.6
HLA-DPB1P04440 TCEA1P3-201ENST00000443005 880 ntBASIC5.03□□□□□ -1.6
HLA-DPB1P04440 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DPB1P04440 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DPB1P04440 AL157777.1-201ENST00000468100 304 ntBASIC5.03□□□□□ -1.6
HLA-DPB1P04440 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-DPB1P04440 COX6B1P2-201ENST00000489624 230 ntBASIC5.03□□□□□ -1.6
HLA-DPB1P04440 AC025458.1-201ENST00000506046 166 ntBASIC5.03□□□□□ -1.6
HLA-DPB1P04440 AC114781.3-201ENST00000512083 142 ntBASIC5.03□□□□□ -1.6
HLA-DPB1P04440 SETP21-201ENST00000514799 892 ntBASIC5.03□□□□□ -1.6
HLA-DPB1P04440 Y_RNA.667-201ENST00000516212 107 ntBASIC5.03□□□□□ -1.6
HLA-DPB1P04440 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DPB1P04440 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DPB1P04440 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DPB1P04440 TOMM20P1-201ENST00000534518 427 ntBASIC5.03□□□□□ -1.6
HLA-DPB1P04440 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-DPB1P04440 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.03□□□□□ -1.6
HLA-DPB1P04440 LINC00556-201ENST00000569603 412 ntBASIC5.03□□□□□ -1.6
HLA-DPB1P04440 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
HLA-DPB1P04440 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DPB1P04440 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-DPB1P04440 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DPB1P04440 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.03□□□□□ -1.6
HLA-DPB1P04440 AL356608.1-201ENST00000610034 820 ntBASIC5.03□□□□□ -1.6
HLA-DPB1P04440 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.03□□□□□ -1.6
HLA-DPB1P04440 MIR6793-201ENST00000612376 63 ntBASIC5.03□□□□□ -1.6
HLA-DPB1P04440 AC026367.3-201ENST00000619032 590 ntBASIC5.03□□□□□ -1.6
HLA-DPB1P04440 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.03□□□□□ -1.6
HLA-DPB1P04440 FRG1EP-201ENST00000634469 770 ntBASIC5.03□□□□□ -1.6
HLA-DPB1P04440 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HLA-DPB1P04440 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DPB1P04440 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DPB1P04440 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
HLA-DPB1P04440 AC006206.1-201ENST00000544842 3387 ntBASIC5.03□□□□□ -1.6
HLA-DPB1P04440 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
HLA-DPB1P04440 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DPB1P04440 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DPB1P04440 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DPB1P04440 MUC2-202ENST00000613187 4845 ntBASIC5.03□□□□□ -1.6
HLA-DPB1P04440 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HLA-DPB1P04440 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms