Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.15□□□□□ -1.42
VTNP04004 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.15□□□□□ -1.42
VTNP04004 AC000068.2-201ENST00000608816 460 ntBASIC6.15□□□□□ -1.42
VTNP04004 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.15□□□□□ -1.42
VTNP04004 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
VTNP04004 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
VTNP04004 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
VTNP04004 HCFC2P1-201ENST00000392864 1592 ntBASIC6.14□□□□□ -1.43
VTNP04004 AC123769.1-201ENST00000530992 3192 ntBASIC6.14□□□□□ -1.43
VTNP04004 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
VTNP04004 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
VTNP04004 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VTNP04004 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
VTNP04004 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
VTNP04004 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
VTNP04004 PABPC1P6-201ENST00000445594 1829 ntBASIC6.14□□□□□ -1.43
VTNP04004 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
VTNP04004 AC068870.1-201ENST00000563737 2455 ntBASIC6.14□□□□□ -1.43
VTNP04004 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
VTNP04004 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
VTNP04004 RNA5SP326-201ENST00000363209 110 ntBASIC6.14□□□□□ -1.43
VTNP04004 RN7SKP6-201ENST00000364795 319 ntBASIC6.14□□□□□ -1.43
VTNP04004 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
VTNP04004 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
VTNP04004 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.14□□□□□ -1.43
VTNP04004 AC096921.1-201ENST00000411661 375 ntBASIC6.14□□□□□ -1.43
VTNP04004 MTND4LP17-201ENST00000414607 293 ntBASIC6.14□□□□□ -1.43
VTNP04004 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC6.14□□□□□ -1.43
VTNP04004 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.14□□□□□ -1.43
VTNP04004 RPL7L1P9-201ENST00000431298 745 ntBASIC6.14□□□□□ -1.43
VTNP04004 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.14□□□□□ -1.43
VTNP04004 RPS26P41-201ENST00000450370 284 ntBASIC6.14□□□□□ -1.43
VTNP04004 RPL7P45-201ENST00000455851 743 ntBASIC6.14□□□□□ -1.43
VTNP04004 AC024558.1-201ENST00000505008 528 ntBASIC6.14□□□□□ -1.43
VTNP04004 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.14□□□□□ -1.43
VTNP04004 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.14□□□□□ -1.43
VTNP04004 RNA5SP116-201ENST00000516132 98 ntBASIC6.14□□□□□ -1.43
VTNP04004 RNA5SP92-201ENST00000516437 110 ntBASIC6.14□□□□□ -1.43
VTNP04004 EIF4EP5-201ENST00000528228 640 ntBASIC6.14□□□□□ -1.43
VTNP04004 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.14□□□□□ -1.43
VTNP04004 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.14□□□□□ -1.43
VTNP04004 AL163952.1-202ENST00000569625 600 ntBASIC6.14□□□□□ -1.43
VTNP04004 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.14□□□□□ -1.43
VTNP04004 MIR4443-201ENST00000585052 53 ntBASIC6.14□□□□□ -1.43
VTNP04004 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.14□□□□□ -1.43
VTNP04004 HIRAP1-201ENST00000605318 787 ntBASIC6.14□□□□□ -1.43
VTNP04004 MIR6837-201ENST00000620884 64 ntBASIC6.14□□□□□ -1.43
VTNP04004 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.14□□□□□ -1.43
VTNP04004 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.14□□□□□ -1.43
VTNP04004 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
VTNP04004 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
VTNP04004 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
VTNP04004 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
VTNP04004 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
VTNP04004 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
VTNP04004 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
VTNP04004 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
VTNP04004 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
VTNP04004 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
VTNP04004 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VTNP04004 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VTNP04004 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VTNP04004 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
VTNP04004 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
VTNP04004 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VTNP04004 AL034546.1-201ENST00000623740 3693 ntBASIC6.13□□□□□ -1.43
VTNP04004 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
VTNP04004 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
VTNP04004 SNORA16A-201ENST00000384342 137 ntBASIC6.13□□□□□ -1.43
VTNP04004 AL035696.2-201ENST00000407941 709 ntBASIC6.13□□□□□ -1.43
VTNP04004 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.13□□□□□ -1.43
VTNP04004 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.13□□□□□ -1.43
VTNP04004 AC008953.1-201ENST00000497334 318 ntBASIC6.13□□□□□ -1.43
VTNP04004 AC111000.5-201ENST00000506559 1178 ntBASIC6.13□□□□□ -1.43
VTNP04004 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC6.13□□□□□ -1.43
VTNP04004 AP001804.1-201ENST00000526868 919 ntBASIC6.13□□□□□ -1.43
VTNP04004 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.13□□□□□ -1.43
VTNP04004 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC6.13□□□□□ -1.43
VTNP04004 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.13□□□□□ -1.43
VTNP04004 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC6.13□□□□□ -1.43
VTNP04004 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC6.13□□□□□ -1.43
VTNP04004 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.13□□□□□ -1.43
VTNP04004 AC016769.4-201ENST00000616893 535 ntBASIC6.13□□□□□ -1.43
VTNP04004 AC008115.4-201ENST00000619780 775 ntBASIC6.13□□□□□ -1.43
VTNP04004 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.13□□□□□ -1.43
VTNP04004 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.13□□□□□ -1.43
VTNP04004 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
VTNP04004 AC109780.1-201ENST00000451768 1344 ntBASIC6.13□□□□□ -1.43
VTNP04004 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
VTNP04004 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC6.13□□□□□ -1.43
VTNP04004 MTCO1P46-201ENST00000451639 1491 ntBASIC6.13□□□□□ -1.43
VTNP04004 AL590763.1-201ENST00000398297 1545 ntBASIC6.13□□□□□ -1.43
VTNP04004 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
VTNP04004 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VTNP04004 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
VTNP04004 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.13□□□□□ -1.43
VTNP04004 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
VTNP04004 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VTNP04004 AC137056.2-201ENST00000624055 1958 ntBASIC6.13□□□□□ -1.43
VTNP04004 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms