Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.22□□□□□ -1.41
CHRNA1P02708 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
CHRNA1P02708 AC087516.1-201ENST00000561236 2428 ntBASIC6.21□□□□□ -1.41
CHRNA1P02708 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.21□□□□□ -1.41
CHRNA1P02708 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.41
CHRNA1P02708 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CHRNA1P02708 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.21□□□□□ -1.42
CHRNA1P02708 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CHRNA1P02708 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.21□□□□□ -1.42
CHRNA1P02708 SNORA74A-201ENST00000364089 198 ntBASIC6.21□□□□□ -1.42
CHRNA1P02708 RN7SKP186-201ENST00000365371 303 ntBASIC6.21□□□□□ -1.42
CHRNA1P02708 RNU4-2-201ENST00000365668 141 ntBASIC6.21□□□□□ -1.42
CHRNA1P02708 SNORA70-201ENST00000384436 135 ntBASIC6.21□□□□□ -1.42
CHRNA1P02708 MIR130A-201ENST00000385274 89 ntBASIC6.21□□□□□ -1.42
CHRNA1P02708 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.21□□□□□ -1.42
CHRNA1P02708 NPM1P22-201ENST00000427761 952 ntBASIC6.21□□□□□ -1.42
CHRNA1P02708 RPL34P27-201ENST00000428810 349 ntBASIC6.21□□□□□ -1.42
CHRNA1P02708 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.21□□□□□ -1.42
CHRNA1P02708 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.21□□□□□ -1.42
CHRNA1P02708 CNOT7P2-201ENST00000441051 832 ntBASIC6.21□□□□□ -1.42
CHRNA1P02708 AC004815.1-201ENST00000484185 331 ntBASIC6.21□□□□□ -1.42
CHRNA1P02708 AC012123.2-201ENST00000485809 248 ntBASIC6.21□□□□□ -1.42
CHRNA1P02708 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.21□□□□□ -1.42
CHRNA1P02708 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.21□□□□□ -1.42
CHRNA1P02708 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.21□□□□□ -1.42
CHRNA1P02708 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.21□□□□□ -1.42
CHRNA1P02708 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.21□□□□□ -1.42
CHRNA1P02708 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.21□□□□□ -1.42
CHRNA1P02708 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
CHRNA1P02708 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CHRNA1P02708 AC008115.4-201ENST00000619780 775 ntBASIC6.21□□□□□ -1.42
CHRNA1P02708 SAMMSON-227ENST00000642114 1199 ntBASIC6.21□□□□□ -1.42
CHRNA1P02708 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.21□□□□□ -1.42
CHRNA1P02708 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.21□□□□□ -1.42
CHRNA1P02708 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
CHRNA1P02708 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
CHRNA1P02708 LINC01963-201ENST00000562038 3148 ntBASIC6.21□□□□□ -1.42
CHRNA1P02708 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
CHRNA1P02708 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CHRNA1P02708 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CHRNA1P02708 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CHRNA1P02708 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CHRNA1P02708 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CHRNA1P02708 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CHRNA1P02708 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CHRNA1P02708 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CHRNA1P02708 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.2□□□□□ -1.42
CHRNA1P02708 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CHRNA1P02708 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CHRNA1P02708 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CHRNA1P02708 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
CHRNA1P02708 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CHRNA1P02708 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CHRNA1P02708 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CHRNA1P02708 MIR937-201ENST00000401271 86 ntBASIC6.2□□□□□ -1.42
CHRNA1P02708 NACAP7-201ENST00000407371 609 ntBASIC6.2□□□□□ -1.42
CHRNA1P02708 DPPA2P2-201ENST00000418220 897 ntBASIC6.2□□□□□ -1.42
CHRNA1P02708 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.2□□□□□ -1.42
CHRNA1P02708 AL139148.1-201ENST00000427122 680 ntBASIC6.2□□□□□ -1.42
CHRNA1P02708 EEF1B2P5-201ENST00000444820 548 ntBASIC6.2□□□□□ -1.42
CHRNA1P02708 RPS26P41-201ENST00000450370 284 ntBASIC6.2□□□□□ -1.42
CHRNA1P02708 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.2□□□□□ -1.42
CHRNA1P02708 RPL7P45-201ENST00000455851 743 ntBASIC6.2□□□□□ -1.42
CHRNA1P02708 RN7SL610P-201ENST00000463845 291 ntBASIC6.2□□□□□ -1.42
CHRNA1P02708 RN7SL51P-201ENST00000468230 285 ntBASIC6.2□□□□□ -1.42
CHRNA1P02708 DUTP1-201ENST00000493631 470 ntBASIC6.2□□□□□ -1.42
CHRNA1P02708 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CHRNA1P02708 HIGD1AP14-201ENST00000507617 282 ntBASIC6.2□□□□□ -1.42
CHRNA1P02708 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.2□□□□□ -1.42
CHRNA1P02708 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.2□□□□□ -1.42
CHRNA1P02708 OR10G5P-201ENST00000532733 358 ntBASIC6.2□□□□□ -1.42
CHRNA1P02708 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.2□□□□□ -1.42
CHRNA1P02708 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.2□□□□□ -1.42
CHRNA1P02708 AL139041.1-201ENST00000605480 610 ntBASIC6.2□□□□□ -1.42
CHRNA1P02708 AC004948.1-201ENST00000609858 672 ntBASIC6.2□□□□□ -1.42
CHRNA1P02708 AC118658.2-201ENST00000618697 459 ntBASIC6.2□□□□□ -1.42
CHRNA1P02708 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.2□□□□□ -1.42
CHRNA1P02708 AL161756.3-201ENST00000641216 2071 ntBASIC6.2□□□□□ -1.42
CHRNA1P02708 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.2□□□□□ -1.42
CHRNA1P02708 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
CHRNA1P02708 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CHRNA1P02708 AC005224.3-201ENST00000584683 2140 ntBASIC6.2□□□□□ -1.42
CHRNA1P02708 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
CHRNA1P02708 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CHRNA1P02708 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CHRNA1P02708 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CHRNA1P02708 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CHRNA1P02708 AC099654.3-201ENST00000447087 1546 ntBASIC6.2□□□□□ -1.42
CHRNA1P02708 AC053481.2-202ENST00000582394 1500 ntBASIC6.2□□□□□ -1.42
CHRNA1P02708 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CHRNA1P02708 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CHRNA1P02708 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
CHRNA1P02708 AC114876.1-201ENST00000490962 1366 ntBASIC6.19□□□□□ -1.42
CHRNA1P02708 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CHRNA1P02708 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CHRNA1P02708 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CHRNA1P02708 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CHRNA1P02708 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CHRNA1P02708 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CHRNA1P02708 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms