Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
KRT6AP02538 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
KRT6AP02538 AC007842.1-201ENST00000597336 2039 ntBASIC5.55□□□□□ -1.52
KRT6AP02538 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRT6AP02538 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
KRT6AP02538 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
KRT6AP02538 AF287957.1-201ENST00000607368 1595 ntBASIC5.55□□□□□ -1.52
KRT6AP02538 CASC19-248ENST00000641674 1356 ntBASIC5.55□□□□□ -1.52
KRT6AP02538 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.54□□□□□ -1.52
KRT6AP02538 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
KRT6AP02538 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.54□□□□□ -1.52
KRT6AP02538 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.54□□□□□ -1.52
KRT6AP02538 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRT6AP02538 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
KRT6AP02538 AC090181.3-201ENST00000624777 1514 ntBASIC5.54□□□□□ -1.52
KRT6AP02538 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRT6AP02538 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
KRT6AP02538 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.54□□□□□ -1.52
KRT6AP02538 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
KRT6AP02538 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.54□□□□□ -1.52
KRT6AP02538 PCAT14-202ENST00000627127 3935 ntBASIC5.54□□□□□ -1.52
KRT6AP02538 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.54□□□□□ -1.52
KRT6AP02538 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.54□□□□□ -1.52
KRT6AP02538 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
KRT6AP02538 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRT6AP02538 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
KRT6AP02538 RN7SKP74-201ENST00000362849 309 ntBASIC5.54□□□□□ -1.52
KRT6AP02538 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
KRT6AP02538 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
KRT6AP02538 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.54□□□□□ -1.52
KRT6AP02538 RN7SKP29-201ENST00000410957 272 ntBASIC5.54□□□□□ -1.52
KRT6AP02538 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.54□□□□□ -1.52
KRT6AP02538 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.54□□□□□ -1.52
KRT6AP02538 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.54□□□□□ -1.52
KRT6AP02538 BX284632.2-201ENST00000421091 399 ntBASIC5.54□□□□□ -1.52
KRT6AP02538 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.54□□□□□ -1.52
KRT6AP02538 AL354893.1-201ENST00000433735 348 ntBASIC5.54□□□□□ -1.52
KRT6AP02538 AC138761.5-201ENST00000433967 325 ntBASIC5.54□□□□□ -1.52
KRT6AP02538 VN1R110P-201ENST00000438988 971 ntBASIC5.54□□□□□ -1.52
KRT6AP02538 AL512605.1-202ENST00000441919 381 ntBASIC5.54□□□□□ -1.52
KRT6AP02538 AL359955.2-201ENST00000445380 353 ntBASIC5.54□□□□□ -1.52
KRT6AP02538 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.54□□□□□ -1.52
KRT6AP02538 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.54□□□□□ -1.52
KRT6AP02538 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.54□□□□□ -1.52
KRT6AP02538 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.54□□□□□ -1.52
KRT6AP02538 LDHAP1-201ENST00000509421 992 ntBASIC5.54□□□□□ -1.52
KRT6AP02538 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.54□□□□□ -1.52
KRT6AP02538 AP004609.2-201ENST00000532177 190 ntBASIC5.54□□□□□ -1.52
KRT6AP02538 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.54□□□□□ -1.52
KRT6AP02538 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRT6AP02538 AC006530.1-201ENST00000555980 571 ntBASIC5.54□□□□□ -1.52
KRT6AP02538 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.54□□□□□ -1.52
KRT6AP02538 MIR5010-201ENST00000582846 120 ntBASIC5.54□□□□□ -1.52
KRT6AP02538 MIR4660-201ENST00000583549 74 ntBASIC5.54□□□□□ -1.52
KRT6AP02538 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.54□□□□□ -1.52
KRT6AP02538 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.54□□□□□ -1.52
KRT6AP02538 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRT6AP02538 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
KRT6AP02538 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
KRT6AP02538 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.54□□□□□ -1.52
KRT6AP02538 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
KRT6AP02538 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRT6AP02538 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.53□□□□□ -1.52
KRT6AP02538 MAPK10-328ENST00000641553 4009 ntBASIC5.53□□□□□ -1.52
KRT6AP02538 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.53□□□□□ -1.52
KRT6AP02538 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRT6AP02538 PROS2P-201ENST00000474651 1951 ntBASIC5.53□□□□□ -1.52
KRT6AP02538 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
KRT6AP02538 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.53□□□□□ -1.52
KRT6AP02538 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
KRT6AP02538 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
KRT6AP02538 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
KRT6AP02538 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
KRT6AP02538 OOSP1-201ENST00000398992 1270 ntBASIC5.53□□□□□ -1.52
KRT6AP02538 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.53□□□□□ -1.52
KRT6AP02538 RNF10P1-201ENST00000418589 369 ntBASIC5.53□□□□□ -1.52
KRT6AP02538 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.53□□□□□ -1.52
KRT6AP02538 AC126120.1-201ENST00000431082 470 ntBASIC5.53□□□□□ -1.52
KRT6AP02538 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
KRT6AP02538 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.53□□□□□ -1.52
KRT6AP02538 AC099670.2-201ENST00000435130 321 ntBASIC5.53□□□□□ -1.52
KRT6AP02538 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.53□□□□□ -1.52
KRT6AP02538 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.53□□□□□ -1.52
KRT6AP02538 AC093166.4-201ENST00000457867 318 ntBASIC5.53□□□□□ -1.52
KRT6AP02538 SNORD125-201ENST00000459538 96 ntBASIC5.53□□□□□ -1.52
KRT6AP02538 DUTP1-201ENST00000493631 470 ntBASIC5.53□□□□□ -1.52
KRT6AP02538 AC122718.2-201ENST00000505325 591 ntBASIC5.53□□□□□ -1.52
KRT6AP02538 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.53□□□□□ -1.52
KRT6AP02538 AC084121.1-201ENST00000533882 835 ntBASIC5.53□□□□□ -1.52
KRT6AP02538 AC137627.1-201ENST00000545761 289 ntBASIC5.53□□□□□ -1.52
KRT6AP02538 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.53□□□□□ -1.52
KRT6AP02538 AL356801.1-201ENST00000559320 294 ntBASIC5.53□□□□□ -1.52
KRT6AP02538 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.53□□□□□ -1.52
KRT6AP02538 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.53□□□□□ -1.52
KRT6AP02538 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.53□□□□□ -1.52
KRT6AP02538 FAM72A-208ENST00000607379 1139 ntBASIC5.53□□□□□ -1.52
KRT6AP02538 AC090607.5-201ENST00000615692 224 ntBASIC5.53□□□□□ -1.52
KRT6AP02538 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
KRT6AP02538 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.53□□□□□ -1.52
KRT6AP02538 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms