Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.6□□□□□ -1.35
OPHN1O60890 SNORA19.3-201ENST00000516165 130 ntBASIC6.6□□□□□ -1.35
OPHN1O60890 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC6.6□□□□□ -1.35
OPHN1O60890 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
OPHN1O60890 ASB8-215ENST00000540782 659 ntTSL 3 BASIC6.6□□□□□ -1.35
OPHN1O60890 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
OPHN1O60890 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.6□□□□□ -1.35
OPHN1O60890 AC025918.2-201ENST00000558683 763 ntBASIC6.6□□□□□ -1.35
OPHN1O60890 MTCYBP23-201ENST00000558717 1102 ntBASIC6.6□□□□□ -1.35
OPHN1O60890 AC092718.4-201ENST00000566639 716 ntBASIC6.6□□□□□ -1.35
OPHN1O60890 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.6□□□□□ -1.35
OPHN1O60890 AC124283.4-201ENST00000581815 456 ntBASIC6.6□□□□□ -1.35
OPHN1O60890 AC107993.1-201ENST00000591343 684 ntBASIC6.6□□□□□ -1.35
OPHN1O60890 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.6□□□□□ -1.35
OPHN1O60890 AL589863.1-201ENST00000595383 631 ntBASIC6.6□□□□□ -1.35
OPHN1O60890 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC6.6□□□□□ -1.35
OPHN1O60890 AL365400.2-201ENST00000605604 902 ntBASIC6.6□□□□□ -1.35
OPHN1O60890 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.6□□□□□ -1.35
OPHN1O60890 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.6□□□□□ -1.35
OPHN1O60890 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.6□□□□□ -1.35
OPHN1O60890 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
OPHN1O60890 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.6□□□□□ -1.35
OPHN1O60890 AC068769.1-201ENST00000474767 2426 ntBASIC6.6□□□□□ -1.35
OPHN1O60890 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
OPHN1O60890 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
OPHN1O60890 AC027279.1-201ENST00000568885 4284 ntBASIC6.6□□□□□ -1.35
OPHN1O60890 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.6□□□□□ -1.35
OPHN1O60890 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.6□□□□□ -1.35
OPHN1O60890 AC093297.3-201ENST00000607056 2517 ntBASIC6.59□□□□□ -1.35
OPHN1O60890 AC006511.3-201ENST00000624929 1783 ntBASIC6.59□□□□□ -1.35
OPHN1O60890 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
OPHN1O60890 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
OPHN1O60890 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.59□□□□□ -1.35
OPHN1O60890 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
OPHN1O60890 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
OPHN1O60890 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
OPHN1O60890 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
OPHN1O60890 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
OPHN1O60890 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.59□□□□□ -1.35
OPHN1O60890 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.59□□□□□ -1.35
OPHN1O60890 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
OPHN1O60890 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
OPHN1O60890 SNORD8-201ENST00000363915 110 ntBASIC6.59□□□□□ -1.35
OPHN1O60890 SNORA70.9-201ENST00000384370 135 ntBASIC6.59□□□□□ -1.35
OPHN1O60890 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
OPHN1O60890 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.59□□□□□ -1.35
OPHN1O60890 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.59□□□□□ -1.35
OPHN1O60890 RNA5SP198-201ENST00000410376 127 ntBASIC6.59□□□□□ -1.35
OPHN1O60890 U3.43-201ENST00000410734 213 ntBASIC6.59□□□□□ -1.35
OPHN1O60890 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.59□□□□□ -1.35
OPHN1O60890 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.59□□□□□ -1.35
OPHN1O60890 AC007568.1-201ENST00000422912 471 ntBASIC6.59□□□□□ -1.35
OPHN1O60890 AC115285.1-201ENST00000424879 736 ntBASIC6.59□□□□□ -1.35
OPHN1O60890 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.59□□□□□ -1.35
OPHN1O60890 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC6.59□□□□□ -1.35
OPHN1O60890 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.59□□□□□ -1.35
OPHN1O60890 FO393414.1-201ENST00000428697 1184 ntBASIC6.59□□□□□ -1.35
OPHN1O60890 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC6.59□□□□□ -1.35
OPHN1O60890 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
OPHN1O60890 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
OPHN1O60890 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC6.59□□□□□ -1.35
OPHN1O60890 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
OPHN1O60890 FABP5P3-201ENST00000437960 408 ntBASIC6.59□□□□□ -1.35
OPHN1O60890 MED6P1-201ENST00000439659 713 ntBASIC6.59□□□□□ -1.35
OPHN1O60890 SOCS5P1-201ENST00000440415 949 ntBASIC6.59□□□□□ -1.35
OPHN1O60890 MTCO1P53-201ENST00000441633 699 ntBASIC6.59□□□□□ -1.35
OPHN1O60890 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC6.59□□□□□ -1.35
OPHN1O60890 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.59□□□□□ -1.35
OPHN1O60890 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.59□□□□□ -1.35
OPHN1O60890 OR52I1-201ENST00000450052 1050 ntBASIC6.59□□□□□ -1.35
OPHN1O60890 HMGB1P7-201ENST00000450921 612 ntBASIC6.59□□□□□ -1.35
OPHN1O60890 AL122001.1-201ENST00000457027 370 ntBASIC6.59□□□□□ -1.35
OPHN1O60890 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.59□□□□□ -1.35
OPHN1O60890 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.59□□□□□ -1.35
OPHN1O60890 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC6.59□□□□□ -1.35
OPHN1O60890 RNU6-311P-201ENST00000516224 102 ntBASIC6.59□□□□□ -1.35
OPHN1O60890 SNORA81.2-201ENST00000516868 170 ntBASIC6.59□□□□□ -1.35
OPHN1O60890 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.59□□□□□ -1.35
OPHN1O60890 IGKV3D-34-201ENST00000522638 302 ntBASIC6.59□□□□□ -1.35
OPHN1O60890 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC6.59□□□□□ -1.35
OPHN1O60890 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC6.59□□□□□ -1.35
OPHN1O60890 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.59□□□□□ -1.35
OPHN1O60890 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
OPHN1O60890 AL121579.2-201ENST00000555466 590 ntBASIC6.59□□□□□ -1.35
OPHN1O60890 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
OPHN1O60890 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.59□□□□□ -1.35
OPHN1O60890 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.59□□□□□ -1.35
OPHN1O60890 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC6.59□□□□□ -1.35
OPHN1O60890 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC6.59□□□□□ -1.35
OPHN1O60890 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.59□□□□□ -1.35
OPHN1O60890 AC245036.5-201ENST00000596330 847 ntBASIC6.59□□□□□ -1.35
OPHN1O60890 AC004805.3-201ENST00000603178 310 ntBASIC6.59□□□□□ -1.35
OPHN1O60890 AC005034.4-201ENST00000603612 899 ntBASIC6.59□□□□□ -1.35
OPHN1O60890 AL160237.3-201ENST00000604114 1013 ntBASIC6.59□□□□□ -1.35
OPHN1O60890 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.59□□□□□ -1.35
OPHN1O60890 AC024589.2-201ENST00000605642 1294 ntBASIC6.59□□□□□ -1.35
OPHN1O60890 AC012213.4-201ENST00000606457 354 ntBASIC6.59□□□□□ -1.35
OPHN1O60890 AC106052.1-201ENST00000608029 497 ntBASIC6.59□□□□□ -1.35
OPHN1O60890 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
OPHN1O60890 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms