Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 RN7SKP74-201ENST00000362849 309 ntBASIC5.5□□□□□ -1.53
SNX3O60493 RNA5SP77-201ENST00000365394 120 ntBASIC5.5□□□□□ -1.53
SNX3O60493 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNX3O60493 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SNX3O60493 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNX3O60493 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNX3O60493 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.5□□□□□ -1.53
SNX3O60493 NIFKP3-201ENST00000417799 865 ntBASIC5.5□□□□□ -1.53
SNX3O60493 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.5□□□□□ -1.53
SNX3O60493 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.5□□□□□ -1.53
SNX3O60493 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.5□□□□□ -1.53
SNX3O60493 TPT1P1-201ENST00000458495 518 ntBASIC5.5□□□□□ -1.53
SNX3O60493 AC012123.2-201ENST00000485809 248 ntBASIC5.5□□□□□ -1.53
SNX3O60493 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.5□□□□□ -1.53
SNX3O60493 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.5□□□□□ -1.53
SNX3O60493 Vault.2-201ENST00000516519 98 ntBASIC5.5□□□□□ -1.53
SNX3O60493 CDC42P3-201ENST00000518493 633 ntBASIC5.5□□□□□ -1.53
SNX3O60493 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC5.5□□□□□ -1.53
SNX3O60493 IGHVII-49-1-201ENST00000521760 224 ntBASIC5.5□□□□□ -1.53
SNX3O60493 AC084851.2-201ENST00000530377 364 ntBASIC5.5□□□□□ -1.53
SNX3O60493 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC5.5□□□□□ -1.53
SNX3O60493 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.5□□□□□ -1.53
SNX3O60493 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.5□□□□□ -1.53
SNX3O60493 CHEK2P2-201ENST00000554701 672 ntBASIC5.5□□□□□ -1.53
SNX3O60493 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNX3O60493 NPM1P45-201ENST00000583151 559 ntBASIC5.5□□□□□ -1.53
SNX3O60493 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.5□□□□□ -1.53
SNX3O60493 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC5.5□□□□□ -1.53
SNX3O60493 BNIP3P41-202ENST00000616656 861 ntBASIC5.5□□□□□ -1.53
SNX3O60493 AC117503.3-201ENST00000623811 601 ntBASIC5.5□□□□□ -1.53
SNX3O60493 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SNX3O60493 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.5□□□□□ -1.53
SNX3O60493 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SNX3O60493 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.5□□□□□ -1.53
SNX3O60493 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC5.5□□□□□ -1.53
SNX3O60493 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.5□□□□□ -1.53
SNX3O60493 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.5□□□□□ -1.53
SNX3O60493 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.5□□□□□ -1.53
SNX3O60493 AC100778.3-201ENST00000580060 1750 ntBASIC5.5□□□□□ -1.53
SNX3O60493 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SNX3O60493 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SNX3O60493 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNX3O60493 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNX3O60493 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNX3O60493 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SNX3O60493 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNX3O60493 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNX3O60493 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
SNX3O60493 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.49□□□□□ -1.53
SNX3O60493 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
SNX3O60493 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNX3O60493 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SNX3O60493 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNX3O60493 RNU6-1331P-201ENST00000363658 106 ntBASIC5.49□□□□□ -1.53
SNX3O60493 SNORD56.6-201ENST00000384569 71 ntBASIC5.49□□□□□ -1.53
SNX3O60493 YWHAZP4-201ENST00000392459 708 ntBASIC5.49□□□□□ -1.53
SNX3O60493 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC5.49□□□□□ -1.53
SNX3O60493 AL161742.1-201ENST00000418154 584 ntBASIC5.49□□□□□ -1.53
SNX3O60493 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.49□□□□□ -1.53
SNX3O60493 MYB-206ENST00000420123 1051 ntTSL 5 BASIC5.49□□□□□ -1.53
SNX3O60493 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SNX3O60493 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.49□□□□□ -1.53
SNX3O60493 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.49□□□□□ -1.53
SNX3O60493 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.49□□□□□ -1.53
SNX3O60493 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.49□□□□□ -1.53
SNX3O60493 Z85994.2-201ENST00000434327 452 ntBASIC5.49□□□□□ -1.53
SNX3O60493 EIF5AP4-201ENST00000441206 465 ntBASIC5.49□□□□□ -1.53
SNX3O60493 AC073909.1-201ENST00000447112 999 ntBASIC5.49□□□□□ -1.53
SNX3O60493 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.49□□□□□ -1.53
SNX3O60493 RPS4XP12-201ENST00000461747 709 ntBASIC5.49□□□□□ -1.53
SNX3O60493 AC005165.2-201ENST00000466070 380 ntBASIC5.49□□□□□ -1.53
SNX3O60493 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.49□□□□□ -1.53
SNX3O60493 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.49□□□□□ -1.53
SNX3O60493 AC105391.1-201ENST00000503155 1045 ntBASIC5.49□□□□□ -1.53
SNX3O60493 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.49□□□□□ -1.53
SNX3O60493 HMGN1P9-201ENST00000515212 298 ntBASIC5.49□□□□□ -1.53
SNX3O60493 AC139365.2-201ENST00000517972 253 ntBASIC5.49□□□□□ -1.53
SNX3O60493 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNX3O60493 AC089984.3-201ENST00000552838 363 ntBASIC5.49□□□□□ -1.53
SNX3O60493 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
SNX3O60493 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.49□□□□□ -1.53
SNX3O60493 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.49□□□□□ -1.53
SNX3O60493 AC067805.1-201ENST00000559344 470 ntBASIC5.49□□□□□ -1.53
SNX3O60493 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC5.49□□□□□ -1.53
SNX3O60493 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.49□□□□□ -1.53
SNX3O60493 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.49□□□□□ -1.53
SNX3O60493 AC245128.3-201ENST00000594721 748 ntBASIC5.49□□□□□ -1.53
SNX3O60493 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.49□□□□□ -1.53
SNX3O60493 AC036176.3-201ENST00000602456 418 ntBASIC5.49□□□□□ -1.53
SNX3O60493 RPSAP75-201ENST00000605848 301 ntBASIC5.49□□□□□ -1.53
SNX3O60493 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.49□□□□□ -1.53
SNX3O60493 AL121985.3-201ENST00000620690 523 ntBASIC5.49□□□□□ -1.53
SNX3O60493 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.49□□□□□ -1.53
SNX3O60493 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNX3O60493 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.49□□□□□ -1.53
SNX3O60493 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
SNX3O60493 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNX3O60493 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
SNX3O60493 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
SNX3O60493 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms