Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 MRPS21P7-201ENST00000566937 238 ntBASIC5.72□□□□□ -1.49
KDELR3O43731 RBM22P12-201ENST00000567098 1255 ntBASIC5.72□□□□□ -1.49
KDELR3O43731 AC012146.2-201ENST00000576545 416 ntBASIC5.72□□□□□ -1.49
KDELR3O43731 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.72□□□□□ -1.49
KDELR3O43731 AC104695.2-201ENST00000605056 775 ntBASIC5.72□□□□□ -1.49
KDELR3O43731 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.72□□□□□ -1.49
KDELR3O43731 AC025574.2-201ENST00000615621 514 ntBASIC5.72□□□□□ -1.49
KDELR3O43731 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
KDELR3O43731 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
KDELR3O43731 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.72□□□□□ -1.49
KDELR3O43731 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.72□□□□□ -1.49
KDELR3O43731 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
KDELR3O43731 AC093297.3-201ENST00000607056 2517 ntBASIC5.72□□□□□ -1.49
KDELR3O43731 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.72□□□□□ -1.49
KDELR3O43731 UGT2B24P-201ENST00000514441 1597 ntBASIC5.72□□□□□ -1.49
KDELR3O43731 ICE2P1-201ENST00000512800 1849 ntBASIC5.71□□□□□ -1.49
KDELR3O43731 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.71□□□□□ -1.49
KDELR3O43731 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.49
KDELR3O43731 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
KDELR3O43731 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
KDELR3O43731 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
KDELR3O43731 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
KDELR3O43731 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
KDELR3O43731 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.71□□□□□ -1.5
KDELR3O43731 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.71□□□□□ -1.5
KDELR3O43731 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.71□□□□□ -1.5
KDELR3O43731 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.71□□□□□ -1.5
KDELR3O43731 AL590399.4-201ENST00000436561 601 ntBASIC5.71□□□□□ -1.5
KDELR3O43731 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.71□□□□□ -1.5
KDELR3O43731 AL391987.1-201ENST00000441025 200 ntBASIC5.71□□□□□ -1.5
KDELR3O43731 SNORD125-201ENST00000459538 96 ntBASIC5.71□□□□□ -1.5
KDELR3O43731 AC090589.1-201ENST00000473109 362 ntBASIC5.71□□□□□ -1.5
KDELR3O43731 ATP5LP5-201ENST00000483050 299 ntBASIC5.71□□□□□ -1.5
KDELR3O43731 RN7SL101P-201ENST00000496350 279 ntBASIC5.71□□□□□ -1.5
KDELR3O43731 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.71□□□□□ -1.5
KDELR3O43731 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.71□□□□□ -1.5
KDELR3O43731 GOLGA5P1-201ENST00000507317 980 ntBASIC5.71□□□□□ -1.5
KDELR3O43731 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.71□□□□□ -1.5
KDELR3O43731 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.71□□□□□ -1.5
KDELR3O43731 SNORD95-201ENST00000579879 68 ntBASIC5.71□□□□□ -1.5
KDELR3O43731 MIR1273E-201ENST00000581165 102 ntBASIC5.71□□□□□ -1.5
KDELR3O43731 H3F3BP2-201ENST00000583907 357 ntBASIC5.71□□□□□ -1.5
KDELR3O43731 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.71□□□□□ -1.5
KDELR3O43731 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.71□□□□□ -1.5
KDELR3O43731 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
KDELR3O43731 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.71□□□□□ -1.5
KDELR3O43731 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
KDELR3O43731 AP000550.3-201ENST00000637734 379 ntBASIC5.71□□□□□ -1.5
KDELR3O43731 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
KDELR3O43731 HSPD1P7-201ENST00000447985 1686 ntBASIC5.71□□□□□ -1.5
KDELR3O43731 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
KDELR3O43731 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KDELR3O43731 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.71□□□□□ -1.5
KDELR3O43731 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.71□□□□□ -1.5
KDELR3O43731 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
KDELR3O43731 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
KDELR3O43731 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KDELR3O43731 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KDELR3O43731 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.7□□□□□ -1.5
KDELR3O43731 AC009962.1-201ENST00000567327 3813 ntBASIC5.7□□□□□ -1.5
KDELR3O43731 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
KDELR3O43731 AL161912.4-201ENST00000623889 2468 ntBASIC5.7□□□□□ -1.5
KDELR3O43731 OR4F13P-202ENST00000560066 2054 ntBASIC5.7□□□□□ -1.5
KDELR3O43731 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.7□□□□□ -1.5
KDELR3O43731 MIR323A-201ENST00000362199 86 ntBASIC5.7□□□□□ -1.5
KDELR3O43731 RNA5SP242-201ENST00000364171 118 ntBASIC5.7□□□□□ -1.5
KDELR3O43731 MIR551A-201ENST00000385042 96 ntBASIC5.7□□□□□ -1.5
KDELR3O43731 RN7SKP206-201ENST00000410823 293 ntBASIC5.7□□□□□ -1.5
KDELR3O43731 CHEK2P5-201ENST00000423877 246 ntBASIC5.7□□□□□ -1.5
KDELR3O43731 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.7□□□□□ -1.5
KDELR3O43731 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.7□□□□□ -1.5
KDELR3O43731 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.7□□□□□ -1.5
KDELR3O43731 VDAC2P4-201ENST00000452925 711 ntBASIC5.7□□□□□ -1.5
KDELR3O43731 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.7□□□□□ -1.5
KDELR3O43731 RPSAP39-201ENST00000467439 883 ntBASIC5.7□□□□□ -1.5
KDELR3O43731 RN7SL174P-201ENST00000475578 289 ntBASIC5.7□□□□□ -1.5
KDELR3O43731 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.7□□□□□ -1.5
KDELR3O43731 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.7□□□□□ -1.5
KDELR3O43731 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.7□□□□□ -1.5
KDELR3O43731 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.7□□□□□ -1.5
KDELR3O43731 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.7□□□□□ -1.5
KDELR3O43731 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.7□□□□□ -1.5
KDELR3O43731 AC107993.1-201ENST00000591343 684 ntBASIC5.7□□□□□ -1.5
KDELR3O43731 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.7□□□□□ -1.5
KDELR3O43731 AC011445.2-201ENST00000599274 173 ntBASIC5.7□□□□□ -1.5
KDELR3O43731 PPATP2-201ENST00000605635 508 ntBASIC5.7□□□□□ -1.5
KDELR3O43731 AL352984.2-202ENST00000613699 155 ntBASIC5.7□□□□□ -1.5
KDELR3O43731 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.7□□□□□ -1.5
KDELR3O43731 MT-RNR2-201ENST00000387347 1559 ntBASIC5.7□□□□□ -1.5
KDELR3O43731 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
KDELR3O43731 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
KDELR3O43731 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.7□□□□□ -1.5
KDELR3O43731 AC027279.4-201ENST00000624371 2072 ntBASIC5.7□□□□□ -1.5
KDELR3O43731 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
KDELR3O43731 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
KDELR3O43731 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
KDELR3O43731 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
KDELR3O43731 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
KDELR3O43731 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
KDELR3O43731 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms