Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM38O00635 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM38O00635 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM38O00635 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM38O00635 SPATA2P1-201ENST00000431223 2055 ntBASIC6.18□□□□□ -1.42
TRIM38O00635 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM38O00635 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM38O00635 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM38O00635 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.18□□□□□ -1.42
TRIM38O00635 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM38O00635 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
TRIM38O00635 RNA5SP510-201ENST00000364697 99 ntBASIC6.18□□□□□ -1.42
TRIM38O00635 GNG5P2-201ENST00000372054 207 ntBASIC6.18□□□□□ -1.42
TRIM38O00635 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM38O00635 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
TRIM38O00635 RN7SKP206-201ENST00000410823 293 ntBASIC6.18□□□□□ -1.42
TRIM38O00635 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM38O00635 OR51A6P-201ENST00000418680 1004 ntBASIC6.18□□□□□ -1.42
TRIM38O00635 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM38O00635 AL353662.1-201ENST00000439099 327 ntBASIC6.18□□□□□ -1.42
TRIM38O00635 SCAND3P1-201ENST00000439854 1060 ntBASIC6.18□□□□□ -1.42
TRIM38O00635 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM38O00635 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM38O00635 AC078857.1-201ENST00000469870 667 ntBASIC6.18□□□□□ -1.42
TRIM38O00635 AC015908.1-201ENST00000478739 476 ntBASIC6.18□□□□□ -1.42
TRIM38O00635 RPL34P33-201ENST00000486062 334 ntBASIC6.18□□□□□ -1.42
TRIM38O00635 RN7SL714P-201ENST00000487050 298 ntBASIC6.18□□□□□ -1.42
TRIM38O00635 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM38O00635 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.18□□□□□ -1.42
TRIM38O00635 SUMO2P4-201ENST00000504193 276 ntBASIC6.18□□□□□ -1.42
TRIM38O00635 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM38O00635 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.18□□□□□ -1.42
TRIM38O00635 MTCO1P31-201ENST00000506355 492 ntBASIC6.18□□□□□ -1.42
TRIM38O00635 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM38O00635 AC034244.2-201ENST00000514668 858 ntBASIC6.18□□□□□ -1.42
TRIM38O00635 RN7SKP238-201ENST00000516483 249 ntBASIC6.18□□□□□ -1.42
TRIM38O00635 RNA5SP340-201ENST00000517132 107 ntBASIC6.18□□□□□ -1.42
TRIM38O00635 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.18□□□□□ -1.42
TRIM38O00635 IGKV2-19-201ENST00000518132 283 ntBASIC6.18□□□□□ -1.42
TRIM38O00635 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC6.18□□□□□ -1.42
TRIM38O00635 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM38O00635 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM38O00635 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM38O00635 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM38O00635 AC005242.1-201ENST00000585658 438 ntBASIC6.18□□□□□ -1.42
TRIM38O00635 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM38O00635 ZNF92P2-201ENST00000600543 1059 ntBASIC6.18□□□□□ -1.42
TRIM38O00635 AC027243.2-201ENST00000602530 724 ntBASIC6.18□□□□□ -1.42
TRIM38O00635 BNIP3P19-201ENST00000605397 577 ntBASIC6.18□□□□□ -1.42
TRIM38O00635 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.18□□□□□ -1.42
TRIM38O00635 AP000894.4-201ENST00000610185 483 ntBASIC6.18□□□□□ -1.42
TRIM38O00635 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.18□□□□□ -1.42
TRIM38O00635 AC009120.7-201ENST00000623452 780 ntBASIC6.18□□□□□ -1.42
TRIM38O00635 AC129915.3-201ENST00000634128 948 ntBASIC6.18□□□□□ -1.42
TRIM38O00635 OR5AC4P-202ENST00000642086 985 ntBASIC6.18□□□□□ -1.42
TRIM38O00635 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM38O00635 AC003973.3-201ENST00000624863 2822 ntBASIC6.18□□□□□ -1.42
TRIM38O00635 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM38O00635 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.18□□□□□ -1.42
TRIM38O00635 EIF3EP1-201ENST00000433978 1316 ntBASIC6.18□□□□□ -1.42
TRIM38O00635 KARSP1-201ENST00000451871 1752 ntBASIC6.18□□□□□ -1.42
TRIM38O00635 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRIM38O00635 AC091305.2-201ENST00000624049 1576 ntBASIC6.18□□□□□ -1.42
TRIM38O00635 AC092724.1-201ENST00000624623 3397 ntBASIC6.18□□□□□ -1.42
TRIM38O00635 AC107021.2-201ENST00000567714 2095 ntBASIC6.18□□□□□ -1.42
TRIM38O00635 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM38O00635 AL359715.3-201ENST00000569267 2123 ntBASIC6.17□□□□□ -1.42
TRIM38O00635 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM38O00635 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.17□□□□□ -1.42
TRIM38O00635 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM38O00635 AL731532.1-201ENST00000623972 4236 ntBASIC6.17□□□□□ -1.42
TRIM38O00635 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
TRIM38O00635 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
TRIM38O00635 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM38O00635 RN7SKP69-201ENST00000365390 305 ntBASIC6.17□□□□□ -1.42
TRIM38O00635 AL121835.1-201ENST00000404250 354 ntBASIC6.17□□□□□ -1.42
TRIM38O00635 U3.43-201ENST00000410734 213 ntBASIC6.17□□□□□ -1.42
TRIM38O00635 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM38O00635 GTF3AP1-201ENST00000416942 1004 ntBASIC6.17□□□□□ -1.42
TRIM38O00635 AC007562.1-201ENST00000421819 517 ntBASIC6.17□□□□□ -1.42
TRIM38O00635 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM38O00635 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM38O00635 ELOCP3-201ENST00000439303 348 ntBASIC6.17□□□□□ -1.42
TRIM38O00635 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM38O00635 AC023274.2-201ENST00000445264 521 ntBASIC6.17□□□□□ -1.42
TRIM38O00635 GXYLT1P1-201ENST00000446657 490 ntBASIC6.17□□□□□ -1.42
TRIM38O00635 RPSAP37-201ENST00000470913 821 ntBASIC6.17□□□□□ -1.42
TRIM38O00635 RN7SL101P-201ENST00000496350 279 ntBASIC6.17□□□□□ -1.42
TRIM38O00635 AC021087.2-201ENST00000504656 1203 ntBASIC6.17□□□□□ -1.42
TRIM38O00635 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM38O00635 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.17□□□□□ -1.42
TRIM38O00635 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM38O00635 HMGN1P15-201ENST00000513870 295 ntBASIC6.17□□□□□ -1.42
TRIM38O00635 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM38O00635 RNU6-415P-201ENST00000516252 97 ntBASIC6.17□□□□□ -1.42
TRIM38O00635 AC060775.1-201ENST00000518241 520 ntBASIC6.17□□□□□ -1.42
TRIM38O00635 VTA1P2-201ENST00000520205 911 ntBASIC6.17□□□□□ -1.42
TRIM38O00635 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM38O00635 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.17□□□□□ -1.42
TRIM38O00635 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms