Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC242426.1-201ENST00000435270 960 ntBASIC6.1□□□□□ -1.43
O00370 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC6.1□□□□□ -1.43
O00370 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.1□□□□□ -1.43
O00370 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.1□□□□□ -1.43
O00370 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.1□□□□□ -1.43
O00370 RPS23P6-201ENST00000466136 431 ntBASIC6.1□□□□□ -1.43
O00370 DEFB109A-201ENST00000482450 265 ntBASIC6.1□□□□□ -1.43
O00370 RPL32P33-201ENST00000487023 394 ntBASIC6.1□□□□□ -1.43
O00370 AC073610.1-201ENST00000489971 396 ntBASIC6.1□□□□□ -1.43
O00370 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.1□□□□□ -1.43
O00370 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
O00370 AC074255.1-201ENST00000511259 501 ntBASIC6.1□□□□□ -1.43
O00370 SCARNA6.1-201ENST00000516989 238 ntBASIC6.1□□□□□ -1.43
O00370 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.1□□□□□ -1.43
O00370 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.1□□□□□ -1.43
O00370 DPPA2P4-201ENST00000563717 878 ntBASIC6.1□□□□□ -1.43
O00370 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.1□□□□□ -1.43
O00370 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.1□□□□□ -1.43
O00370 AC005618.4-201ENST00000625053 554 ntBASIC6.1□□□□□ -1.43
O00370 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
O00370 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
O00370 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
O00370 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.09□□□□□ -1.43
O00370 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
O00370 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.09□□□□□ -1.43
O00370 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
O00370 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.09□□□□□ -1.43
O00370 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
O00370 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.09□□□□□ -1.43
O00370 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
O00370 MIR375-201ENST00000362103 64 ntBASIC6.09□□□□□ -1.43
O00370 RPS3AP2-201ENST00000407190 754 ntBASIC6.09□□□□□ -1.43
O00370 IPPKP1-201ENST00000422501 768 ntBASIC6.09□□□□□ -1.43
O00370 VN1R21P-201ENST00000426703 765 ntBASIC6.09□□□□□ -1.43
O00370 AL590399.4-201ENST00000436561 601 ntBASIC6.09□□□□□ -1.43
O00370 AC073072.2-201ENST00000447425 348 ntBASIC6.09□□□□□ -1.43
O00370 MTND4LP12-201ENST00000448237 295 ntBASIC6.09□□□□□ -1.43
O00370 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.09□□□□□ -1.43
O00370 AC144530.1-201ENST00000452862 555 ntBASIC6.09□□□□□ -1.43
O00370 RN7SL570P-201ENST00000484405 292 ntBASIC6.09□□□□□ -1.43
O00370 PDCL3P4-201ENST00000489621 720 ntBASIC6.09□□□□□ -1.43
O00370 NPM1P28-201ENST00000492269 840 ntBASIC6.09□□□□□ -1.43
O00370 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
O00370 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
O00370 RN7SKP5-201ENST00000517045 272 ntBASIC6.09□□□□□ -1.43
O00370 AC021678.3-201ENST00000517893 476 ntBASIC6.09□□□□□ -1.43
O00370 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.09□□□□□ -1.43
O00370 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.09□□□□□ -1.43
O00370 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
O00370 AC116158.1-201ENST00000560231 2129 ntBASIC6.09□□□□□ -1.43
O00370 AC019322.1-201ENST00000571869 389 ntBASIC6.09□□□□□ -1.43
O00370 AP005901.4-201ENST00000577336 569 ntBASIC6.09□□□□□ -1.43
O00370 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.09□□□□□ -1.43
O00370 RN7SL544P-201ENST00000617232 284 ntBASIC6.09□□□□□ -1.43
O00370 RN7SL763P-201ENST00000620922 284 ntBASIC6.09□□□□□ -1.43
O00370 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.09□□□□□ -1.43
O00370 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
O00370 AC004158.1-201ENST00000564508 4319 ntBASIC6.09□□□□□ -1.43
O00370 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
O00370 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
O00370 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
O00370 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
O00370 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
O00370 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
O00370 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
O00370 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.08□□□□□ -1.44
O00370 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
O00370 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.08□□□□□ -1.44
O00370 AC007842.1-201ENST00000597336 2039 ntBASIC6.08□□□□□ -1.44
O00370 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
O00370 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
O00370 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
O00370 AC104964.3-201ENST00000606115 2860 ntBASIC6.08□□□□□ -1.44
O00370 RN7SKP81-201ENST00000365603 331 ntBASIC6.08□□□□□ -1.44
O00370 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
O00370 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
O00370 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.08□□□□□ -1.44
O00370 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC6.08□□□□□ -1.44
O00370 AL358876.1-201ENST00000453364 1075 ntBASIC6.08□□□□□ -1.44
O00370 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
O00370 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
O00370 AC022215.1-201ENST00000481770 362 ntBASIC6.08□□□□□ -1.44
O00370 DUTP1-201ENST00000493631 470 ntBASIC6.08□□□□□ -1.44
O00370 OR2A3P-201ENST00000493774 953 ntBASIC6.08□□□□□ -1.44
O00370 PSMA2P2-201ENST00000504319 686 ntBASIC6.08□□□□□ -1.44
O00370 GLUD1P3-202ENST00000508551 200 ntBASIC6.08□□□□□ -1.44
O00370 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.08□□□□□ -1.44
O00370 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.08□□□□□ -1.44
O00370 AC111000.6-201ENST00000514471 709 ntBASIC6.08□□□□□ -1.44
O00370 SNORA70.11-201ENST00000515987 138 ntBASIC6.08□□□□□ -1.44
O00370 SNORA70.13-201ENST00000516116 138 ntBASIC6.08□□□□□ -1.44
O00370 OR4A43P-201ENST00000532938 908 ntBASIC6.08□□□□□ -1.44
O00370 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.08□□□□□ -1.44
O00370 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.08□□□□□ -1.44
O00370 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.08□□□□□ -1.44
O00370 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.08□□□□□ -1.44
O00370 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.08□□□□□ -1.44
O00370 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.08□□□□□ -1.44
O00370 AC063977.5-201ENST00000601044 974 ntBASIC6.08□□□□□ -1.44
O00370 HIRAP1-201ENST00000605318 787 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms