Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RFXAPO00287 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
RFXAPO00287 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RFXAPO00287 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RFXAPO00287 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RFXAPO00287 CTAGE11P-201ENST00000451540 2353 ntBASIC6.81□□□□□ -1.32
RFXAPO00287 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RFXAPO00287 SPATA31C1-201ENST00000420021 3895 ntBASIC6.81□□□□□ -1.32
RFXAPO00287 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC6.81□□□□□ -1.32
RFXAPO00287 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
RFXAPO00287 RNA5SP65-201ENST00000363166 119 ntBASIC6.81□□□□□ -1.32
RFXAPO00287 RNU6-1214P-201ENST00000363650 109 ntBASIC6.81□□□□□ -1.32
RFXAPO00287 SNORD51.1-201ENST00000365405 77 ntBASIC6.81□□□□□ -1.32
RFXAPO00287 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
RFXAPO00287 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RFXAPO00287 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RFXAPO00287 MTND4P24-201ENST00000424002 397 ntBASIC6.81□□□□□ -1.32
RFXAPO00287 AL157884.1-201ENST00000424561 454 ntBASIC6.81□□□□□ -1.32
RFXAPO00287 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC6.81□□□□□ -1.32
RFXAPO00287 IGLV3-4-201ENST00000432300 244 ntBASIC6.81□□□□□ -1.32
RFXAPO00287 AC007000.2-201ENST00000442564 487 ntBASIC6.81□□□□□ -1.32
RFXAPO00287 AC016908.1-201ENST00000442571 1219 ntBASIC6.81□□□□□ -1.32
RFXAPO00287 VN1R32P-201ENST00000452234 905 ntBASIC6.81□□□□□ -1.32
RFXAPO00287 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.81□□□□□ -1.32
RFXAPO00287 NDUFA12P1-201ENST00000455914 406 ntBASIC6.81□□□□□ -1.32
RFXAPO00287 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC6.81□□□□□ -1.32
RFXAPO00287 EIF3LP3-201ENST00000495197 822 ntBASIC6.81□□□□□ -1.32
RFXAPO00287 PRMT5P1-201ENST00000514351 598 ntBASIC6.81□□□□□ -1.32
RFXAPO00287 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC6.81□□□□□ -1.32
RFXAPO00287 MTCO1P49-201ENST00000523429 802 ntBASIC6.81□□□□□ -1.32
RFXAPO00287 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RFXAPO00287 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC6.81□□□□□ -1.32
RFXAPO00287 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.81□□□□□ -1.32
RFXAPO00287 PCNPP1-201ENST00000552501 511 ntBASIC6.81□□□□□ -1.32
RFXAPO00287 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.81□□□□□ -1.32
RFXAPO00287 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.81□□□□□ -1.32
RFXAPO00287 AL356801.1-201ENST00000559320 294 ntBASIC6.81□□□□□ -1.32
RFXAPO00287 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC6.81□□□□□ -1.32
RFXAPO00287 AC027455.1-201ENST00000574104 594 ntBASIC6.81□□□□□ -1.32
RFXAPO00287 MIR1273E-201ENST00000581165 102 ntBASIC6.81□□□□□ -1.32
RFXAPO00287 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.81□□□□□ -1.32
RFXAPO00287 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.81□□□□□ -1.32
RFXAPO00287 AL352984.2-201ENST00000611153 546 ntBASIC6.81□□□□□ -1.32
RFXAPO00287 AL359314.1-201ENST00000616913 261 ntBASIC6.81□□□□□ -1.32
RFXAPO00287 AC131159.1-201ENST00000621854 213 ntBASIC6.81□□□□□ -1.32
RFXAPO00287 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.81□□□□□ -1.32
RFXAPO00287 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.81□□□□□ -1.32
RFXAPO00287 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC6.81□□□□□ -1.32
RFXAPO00287 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.81□□□□□ -1.32
RFXAPO00287 OR8B1P-202ENST00000641132 1178 ntBASIC6.81□□□□□ -1.32
RFXAPO00287 AC127070.3-201ENST00000503695 3263 ntBASIC6.81□□□□□ -1.32
RFXAPO00287 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
RFXAPO00287 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
RFXAPO00287 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
RFXAPO00287 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
RFXAPO00287 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RFXAPO00287 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RFXAPO00287 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RFXAPO00287 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC6.81□□□□□ -1.32
RFXAPO00287 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.81□□□□□ -1.32
RFXAPO00287 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
RFXAPO00287 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RFXAPO00287 AL035530.2-201ENST00000607391 1675 ntTSL 3 BASIC6.81□□□□□ -1.32
RFXAPO00287 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC6.8□□□□□ -1.32
RFXAPO00287 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
RFXAPO00287 MTND5P29-201ENST00000458676 1807 ntBASIC6.8□□□□□ -1.32
RFXAPO00287 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RFXAPO00287 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC6.8□□□□□ -1.32
RFXAPO00287 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
RFXAPO00287 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RFXAPO00287 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RFXAPO00287 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RFXAPO00287 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.8□□□□□ -1.32
RFXAPO00287 AL133243.2-201ENST00000610331 1621 ntBASIC6.8□□□□□ -1.32
RFXAPO00287 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
RFXAPO00287 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.8□□□□□ -1.32
RFXAPO00287 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RFXAPO00287 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RFXAPO00287 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.8□□□□□ -1.32
RFXAPO00287 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RFXAPO00287 OR9K1P-201ENST00000326513 941 ntBASIC6.8□□□□□ -1.32
RFXAPO00287 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RFXAPO00287 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC6.8□□□□□ -1.32
RFXAPO00287 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
RFXAPO00287 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RFXAPO00287 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RFXAPO00287 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RFXAPO00287 RNA5SP346-201ENST00000363541 121 ntBASIC6.8□□□□□ -1.32
RFXAPO00287 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.8□□□□□ -1.32
RFXAPO00287 CGA-201ENST00000369582 729 ntTSL 5 BASIC6.8□□□□□ -1.32
RFXAPO00287 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
RFXAPO00287 RNU6-517P-201ENST00000384362 110 ntBASIC6.8□□□□□ -1.32
RFXAPO00287 AC008171.1-201ENST00000395058 200 ntBASIC6.8□□□□□ -1.32
RFXAPO00287 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.8□□□□□ -1.32
RFXAPO00287 SFR1P1-201ENST00000403720 688 ntBASIC6.8□□□□□ -1.32
RFXAPO00287 TANK-206ENST00000406287 875 ntTSL 5 BASIC6.8□□□□□ -1.32
RFXAPO00287 RN7SKP263-201ENST00000411194 309 ntBASIC6.8□□□□□ -1.32
RFXAPO00287 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC6.8□□□□□ -1.32
RFXAPO00287 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
RFXAPO00287 AL606495.1-201ENST00000422100 813 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms