Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC069234.4-201ENST00000621276 412 ntBASIC5.36□□□□□ -1.55
NPIPA2E9PIF3 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.36□□□□□ -1.55
NPIPA2E9PIF3 AC099654.6-201ENST00000636487 512 ntBASIC5.36□□□□□ -1.55
NPIPA2E9PIF3 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.36□□□□□ -1.55
NPIPA2E9PIF3 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.36□□□□□ -1.55
NPIPA2E9PIF3 AC011503.2-201ENST00000594230 1500 ntBASIC5.36□□□□□ -1.55
NPIPA2E9PIF3 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NPIPA2E9PIF3 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NPIPA2E9PIF3 CUL4AP1-201ENST00000514750 1863 ntBASIC5.36□□□□□ -1.55
NPIPA2E9PIF3 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.36□□□□□ -1.55
NPIPA2E9PIF3 AC007342.5-201ENST00000571340 2142 ntBASIC5.36□□□□□ -1.55
NPIPA2E9PIF3 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NPIPA2E9PIF3 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 MIR375-201ENST00000362103 64 ntBASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 SNORD1C-201ENST00000363315 78 ntBASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 RNU11-201ENST00000387069 134 ntBASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 AL513325.1-201ENST00000417716 1034 ntBASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 KIF4CP-201ENST00000422742 1279 ntBASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 AL390879.1-201ENST00000439143 386 ntBASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 SLC25A51P1-201ENST00000468432 871 ntBASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 GAPDHP71-201ENST00000511530 1003 ntBASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 RN7SKP67-201ENST00000515905 235 ntBASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 RN7SKP288-201ENST00000516227 268 ntBASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 RNU4-18P-201ENST00000516751 149 ntBASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 CYCSP22-201ENST00000517555 339 ntBASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 AC020978.7-201ENST00000575953 1187 ntBASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 SNORD95-201ENST00000579879 68 ntBASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 AP001496.3-201ENST00000580230 913 ntBASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 VN1R81P-201ENST00000602085 372 ntBASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 AL360012.1-201ENST00000602813 131 ntBASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 AC004477.3-201ENST00000614061 590 ntBASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 AL049767.1-202ENST00000637826 242 ntBASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 MIR193BHG-214ENST00000641765 509 ntBASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NPIPA2E9PIF3 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 AC022164.1-201ENST00000568767 2673 ntBASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 Z83820.1-201ENST00000456978 1499 ntBASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 AC092111.2-201ENST00000611627 1414 ntBASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 SDHDP6-201ENST00000414693 480 ntBASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 AC099677.3-201ENST00000427081 395 ntBASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.34□□□□□ -1.55
NPIPA2E9PIF3 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms