Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 AC011447.7-201ENST00000624228 1590 ntBASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 RNA5SP308-201ENST00000362532 115 ntBASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 RNU6-249P-201ENST00000363016 102 ntBASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 RN7SKP286-201ENST00000410894 299 ntBASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 RN7SKP144-201ENST00000411108 279 ntBASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 RPL21P50-201ENST00000417698 477 ntBASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 RPS4XP5-201ENST00000419038 768 ntBASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 THEM7P-201ENST00000419556 672 ntBASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 CDC42P6-201ENST00000421246 576 ntBASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 RPL19P16-201ENST00000433839 588 ntBASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 E2F6P3-201ENST00000441743 743 ntBASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 BMS1P10-201ENST00000443754 1120 ntBASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 OR7E116P-201ENST00000448529 957 ntBASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 CEACAMP11-201ENST00000455211 583 ntBASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 AC093664.1-201ENST00000511779 289 ntBASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 AL589743.6-201ENST00000611025 117 ntBASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 AC024884.1-201ENST00000620583 399 ntBASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 AC005899.6-201ENST00000620729 297 ntBASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 uc_338.7-201ENST00000621834 124 ntBASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 MIR6503-201ENST00000622884 86 ntBASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 AP001962.1-201ENST00000624114 559 ntBASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 DRG1-207ENST00000629688 309 ntTSL 5 BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 AL022322.2-201ENST00000624072 20397 ntBASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 AC100778.3-201ENST00000580060 1750 ntBASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 AC083843.2-201ENST00000568248 6253 ntBASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 AC068870.1-201ENST00000563737 2455 ntBASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 SNORA7A-201ENST00000384765 139 ntBASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 SNRPEP6-201ENST00000407465 277 ntBASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 AC006509.1-201ENST00000420788 634 ntBASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 AC002127.1-201ENST00000421305 225 ntBASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 NANOGP4-201ENST00000427230 913 ntBASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 GTF3AP6-201ENST00000432585 986 ntBASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 IGBP1P3-201ENST00000447449 1000 ntBASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 RPS18P1-201ENST00000447840 458 ntBASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 AC090804.1-201ENST00000448870 490 ntBASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 AC063955.1-201ENST00000462872 685 ntBASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 RPL34P33-201ENST00000486062 334 ntBASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 AC008629.2-201ENST00000503783 483 ntBASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 AC111000.5-201ENST00000506559 1178 ntBASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 NREP-217ENST00000509025 987 ntTSL 3 BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 NREP-223ENST00000515855 801 ntTSL 4 BASIC4.43□□□□□ -1.7
RBFOX3A6NFN3 Vault.2-201ENST00000516519 98 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms