Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 GAPDHP48-201ENST00000436626 961 ntBASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 AC096775.1-201ENST00000437724 448 ntBASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 AL161636.2-201ENST00000445179 927 ntBASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 RPS23P6-201ENST00000466136 431 ntBASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 AC006539.1-201ENST00000481419 501 ntBASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 AC022215.1-201ENST00000481770 362 ntBASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 RPL32P33-201ENST00000487023 394 ntBASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 RPL7P51-201ENST00000490532 749 ntBASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 AC104109.1-201ENST00000498563 436 ntBASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 CYCSP22-201ENST00000517555 339 ntBASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 AC139365.2-201ENST00000517972 253 ntBASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 AC112191.2-201ENST00000522428 333 ntBASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 AC016911.1-201ENST00000613297 452 ntBASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 AC087565.3-203ENST00000641018 837 ntBASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SNX9Q9Y5X1 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 KARSP1-201ENST00000451871 1752 ntBASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 RNA5SP394-201ENST00000364216 119 ntBASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 RN7SKP78-201ENST00000364711 318 ntBASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 RNU1-59P-201ENST00000364829 162 ntBASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 AC019070.1-201ENST00000415008 1024 ntBASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 SUMO2P3-201ENST00000438311 288 ntBASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 AL390879.1-201ENST00000439143 386 ntBASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 HMGN1P36-201ENST00000446623 298 ntBASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 RNU7-157P-201ENST00000459600 66 ntBASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 RPSAP37-201ENST00000470913 821 ntBASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 AC009120.1-201ENST00000493458 473 ntBASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 IGLVIV-64-201ENST00000518581 301 ntBASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 AC078899.1-201ENST00000521432 1185 ntBASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 IGKV3D-34-201ENST00000522638 302 ntBASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 EIF1AXP2-201ENST00000555940 413 ntBASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 HMGN2P47-201ENST00000559378 272 ntBASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 LSM1P2-201ENST00000604911 322 ntBASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 U1.25-201ENST00000614085 162 ntBASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 U1.34-201ENST00000618578 162 ntBASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 U1.31-201ENST00000620022 160 ntBASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 AC008691.1-209ENST00000642094 814 ntBASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 AC015799.1-201ENST00000622996 3122 ntBASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
SNX9Q9Y5X1 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 AC027279.1-201ENST00000568885 4284 ntBASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SNX9Q9Y5X1 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms