Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
ATG4BQ9Y4P1 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.46□□□□□ -1.53
ATG4BQ9Y4P1 AC018628.1-201ENST00000624147 3819 ntBASIC5.46□□□□□ -1.53
ATG4BQ9Y4P1 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
ATG4BQ9Y4P1 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.53
ATG4BQ9Y4P1 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
ATG4BQ9Y4P1 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 AC239868.2-201ENST00000564237 4527 ntBASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 AL161912.4-201ENST00000623889 2468 ntBASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 MTHFD2P5-201ENST00000320415 844 ntBASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 snoU13.29-201ENST00000459370 104 ntBASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 AC011476.1-201ENST00000466725 307 ntBASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 ST13P12-201ENST00000508958 1094 ntBASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 COX6CP7-201ENST00000597056 208 ntBASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 AL356752.1-201ENST00000615844 593 ntBASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 OR8G3P-202ENST00000641572 1255 ntBASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 AC091305.2-201ENST00000624049 1576 ntBASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ATG4BQ9Y4P1 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 MSL3P1-202ENST00000440028 1468 ntBASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 OR52B3P-201ENST00000314715 928 ntBASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 RNA5SP510-201ENST00000364697 99 ntBASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 RNA5SP122-201ENST00000384457 108 ntBASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 AL589994.1-201ENST00000404962 340 ntBASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 SETP9-201ENST00000423837 832 ntBASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 AL512637.1-201ENST00000439523 1231 ntBASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 AC073109.1-201ENST00000445066 978 ntBASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 OR7E116P-201ENST00000448529 957 ntBASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 RPS17P15-201ENST00000475609 349 ntBASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 AC093719.1-201ENST00000480427 441 ntBASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 PDCL3P4-201ENST00000489621 720 ntBASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 AL133372.1-201ENST00000493565 745 ntBASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 IGKV2-4-201ENST00000523070 340 ntBASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 AC096996.1-201ENST00000563813 325 ntBASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 AC060780.2-201ENST00000589047 198 ntBASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.45□□□□□ -1.54
ATG4BQ9Y4P1 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms